Gene : Thecc1EG043645 T. cacao v1.1
Defline:  (1 of 102) PF00098 - Zinc knuckle (zf-CCHC) Genomic Order:  968
Name:  ? Thecc1EG043645 Secondary Identifier:  ? PAC:27443112
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043645 0.5kb upstream 0.5kb upstream 6565 true scaffold_10r: 8408452-8415016 Theobroma cacao
Thecc1EG043645 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 8414517-8415016 Theobroma cacao
Thecc1EG043645 0.5kb downstream 0.5kb downstream 6565 true scaffold_10r: 8407952-8414516 Theobroma cacao
Thecc1EG043645 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 8407952-8408451 Theobroma cacao
Thecc1EG043645 1.0kb upstream 1.0kb upstream 7065 true scaffold_10r: 8408452-8415516 Theobroma cacao
Thecc1EG043645 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 8414517-8415516 Theobroma cacao
Thecc1EG043645 1.0kb downstream 1.0kb downstream 7065 true scaffold_10r: 8407452-8414516 Theobroma cacao
Thecc1EG043645 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 8407452-8408451 Theobroma cacao
Thecc1EG043645 2.0kb upstream 2.0kb upstream 8065 true scaffold_10r: 8408452-8416516 Theobroma cacao
Thecc1EG043645 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 8414517-8416516 Theobroma cacao
Thecc1EG043645 2.0kb downstream 2.0kb downstream 8065 true scaffold_10r: 8406452-8414516 Theobroma cacao
Thecc1EG043645 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 8406452-8408451 Theobroma cacao
Thecc1EG043645 5.0kb upstream 5.0kb upstream 11065 true scaffold_10r: 8408452-8419516 Theobroma cacao
Thecc1EG043645 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 8414517-8419516 Theobroma cacao
Thecc1EG043645 5.0kb downstream 5.0kb downstream 11065 true scaffold_10r: 8403452-8414516 Theobroma cacao
Thecc1EG043645 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 8403452-8408451 Theobroma cacao
Thecc1EG043645 10.0kb upstream 10.0kb upstream 16065 true scaffold_10r: 8408452-8424516 Theobroma cacao
Thecc1EG043645 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 8414517-8424516 Theobroma cacao
Thecc1EG043645 10.0kb downstream 10.0kb downstream 16065 true scaffold_10r: 8398452-8414516 Theobroma cacao
Thecc1EG043645 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 8398452-8408451 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121519585 5273 Angiosperm Singleton cluster - no MSA
123816620 5264 Brassicales-Malvales Singleton cluster - no MSA
124313012 5266 SBM Singleton cluster - no MSA
124162146 5268 Malvidae Singleton cluster - no MSA
123886064 5270 Rosid Singleton cluster - no MSA
123468600 5271 Pentapetalae Singleton cluster - no MSA
122503896 5272 Eudicot Singleton cluster - no MSA
120792395 5274 Embryophyte Singleton cluster - no MSA
122834008 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain