Gene : Thecc1EG044660 T. cacao v1.1
Defline:  (1 of 3) PTHR26402:SF411 - PROTEIN RESPONSE REGULATOR 23 Genomic Order:  1328
Name:  ? Thecc1EG044660 Secondary Identifier:  ? PAC:27443785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044660 0.5kb upstream 0.5kb upstream 1921 true scaffold_10r: 18504521-18506441 Theobroma cacao
Thecc1EG044660 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 18505942-18506441 Theobroma cacao
Thecc1EG044660 0.5kb downstream 0.5kb downstream 1921 true scaffold_10r: 18504021-18505941 Theobroma cacao
Thecc1EG044660 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 18504021-18504520 Theobroma cacao
Thecc1EG044660 1.0kb upstream 1.0kb upstream 2421 true scaffold_10r: 18504521-18506941 Theobroma cacao
Thecc1EG044660 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 18505942-18506941 Theobroma cacao
Thecc1EG044660 1.0kb downstream 1.0kb downstream 2421 true scaffold_10r: 18503521-18505941 Theobroma cacao
Thecc1EG044660 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 18503521-18504520 Theobroma cacao
Thecc1EG044660 2.0kb upstream 2.0kb upstream 3421 true scaffold_10r: 18504521-18507941 Theobroma cacao
Thecc1EG044660 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 18505942-18507941 Theobroma cacao
Thecc1EG044660 2.0kb downstream 2.0kb downstream 3421 true scaffold_10r: 18502521-18505941 Theobroma cacao
Thecc1EG044660 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 18502521-18504520 Theobroma cacao
Thecc1EG044660 5.0kb upstream 5.0kb upstream 6421 true scaffold_10r: 18504521-18510941 Theobroma cacao
Thecc1EG044660 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 18505942-18510941 Theobroma cacao
Thecc1EG044660 5.0kb downstream 5.0kb downstream 6421 true scaffold_10r: 18499521-18505941 Theobroma cacao
Thecc1EG044660 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 18499521-18504520 Theobroma cacao
Thecc1EG044660 10.0kb upstream 10.0kb upstream 11421 true scaffold_10r: 18504521-18515941 Theobroma cacao
Thecc1EG044660 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 18505942-18515941 Theobroma cacao
Thecc1EG044660 10.0kb downstream 10.0kb downstream 11421 true scaffold_10r: 18494521-18505941 Theobroma cacao
Thecc1EG044660 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 18494521-18504520 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123816754 5264 Brassicales-Malvales Singleton cluster - no MSA
124313139 5266 SBM Singleton cluster - no MSA
124162260 5268 Malvidae Singleton cluster - no MSA
124074544 5270 Rosid View MSA
123752744 5271 Pentapetalae View MSA
122797364 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain