Gene : Thecc1EG044774 T. cacao v1.1
Defline:  (1 of 1) PTHR31696:SF4 - EXPRESSED PROTEIN Genomic Order:  1403
Name:  ? Thecc1EG044774 Secondary Identifier:  ? PAC:27441439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044774 0.5kb upstream 0.5kb upstream 2610 true scaffold_10r: 19387073-19389682 Theobroma cacao
Thecc1EG044774 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 19389183-19389682 Theobroma cacao
Thecc1EG044774 0.5kb downstream 0.5kb downstream 2610 true scaffold_10r: 19386573-19389182 Theobroma cacao
Thecc1EG044774 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 19386573-19387072 Theobroma cacao
Thecc1EG044774 1.0kb upstream 1.0kb upstream 3110 true scaffold_10r: 19387073-19390182 Theobroma cacao
Thecc1EG044774 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 19389183-19390182 Theobroma cacao
Thecc1EG044774 1.0kb downstream 1.0kb downstream 3110 true scaffold_10r: 19386073-19389182 Theobroma cacao
Thecc1EG044774 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 19386073-19387072 Theobroma cacao
Thecc1EG044774 2.0kb upstream 2.0kb upstream 4110 true scaffold_10r: 19387073-19391182 Theobroma cacao
Thecc1EG044774 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 19389183-19391182 Theobroma cacao
Thecc1EG044774 2.0kb downstream 2.0kb downstream 4110 true scaffold_10r: 19385073-19389182 Theobroma cacao
Thecc1EG044774 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 19385073-19387072 Theobroma cacao
Thecc1EG044774 5.0kb upstream 5.0kb upstream 7110 true scaffold_10r: 19387073-19394182 Theobroma cacao
Thecc1EG044774 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 19389183-19394182 Theobroma cacao
Thecc1EG044774 5.0kb downstream 5.0kb downstream 7110 true scaffold_10r: 19382073-19389182 Theobroma cacao
Thecc1EG044774 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 19382073-19387072 Theobroma cacao
Thecc1EG044774 10.0kb upstream 10.0kb upstream 12110 true scaffold_10r: 19387073-19399182 Theobroma cacao
Thecc1EG044774 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 19389183-19399182 Theobroma cacao
Thecc1EG044774 10.0kb downstream 10.0kb downstream 12110 true scaffold_10r: 19377073-19389182 Theobroma cacao
Thecc1EG044774 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 19377073-19387072 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827559 5264 Brassicales-Malvales View MSA
124341414 5266 SBM View MSA
124243407 5268 Malvidae View MSA
124073904 5270 Rosid View MSA
123746420 5271 Pentapetalae View MSA
122793418 5272 Eudicot View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain