Gene : Thecc1EG045539 T. cacao v1.1
Defline:  (1 of 2) PTHR11404//PTHR11404:SF6 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  1805
Name:  ? Thecc1EG045539 Secondary Identifier:  ? PAC:27441865
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao DETOX1-PWY Theobroma cacao pathologic  
Tcacao DETOX1-PWY-1 Theobroma cacao pathologic  
Tcacao PWY-6854 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG045539 0.5kb upstream 0.5kb upstream 3633 true scaffold_10r: 25061596-25065228 Theobroma cacao
Thecc1EG045539 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 25061596-25062095 Theobroma cacao
Thecc1EG045539 0.5kb downstream 0.5kb downstream 3633 true scaffold_10r: 25062096-25065728 Theobroma cacao
Thecc1EG045539 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 25065229-25065728 Theobroma cacao
Thecc1EG045539 1.0kb upstream 1.0kb upstream 4133 true scaffold_10r: 25061096-25065228 Theobroma cacao
Thecc1EG045539 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 25061096-25062095 Theobroma cacao
Thecc1EG045539 1.0kb downstream 1.0kb downstream 4133 true scaffold_10r: 25062096-25066228 Theobroma cacao
Thecc1EG045539 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 25065229-25066228 Theobroma cacao
Thecc1EG045539 2.0kb upstream 2.0kb upstream 5133 true scaffold_10r: 25060096-25065228 Theobroma cacao
Thecc1EG045539 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 25060096-25062095 Theobroma cacao
Thecc1EG045539 2.0kb downstream 2.0kb downstream 5133 true scaffold_10r: 25062096-25067228 Theobroma cacao
Thecc1EG045539 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 25065229-25067228 Theobroma cacao
Thecc1EG045539 5.0kb upstream 5.0kb upstream 8133 true scaffold_10r: 25057096-25065228 Theobroma cacao
Thecc1EG045539 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 25057096-25062095 Theobroma cacao
Thecc1EG045539 5.0kb downstream 5.0kb downstream 8133 true scaffold_10r: 25062096-25070228 Theobroma cacao
Thecc1EG045539 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 25065229-25070228 Theobroma cacao
Thecc1EG045539 10.0kb upstream 10.0kb upstream 13133 true scaffold_10r: 25052096-25065228 Theobroma cacao
Thecc1EG045539 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 25052096-25062095 Theobroma cacao
Thecc1EG045539 10.0kb downstream 10.0kb downstream 13133 true scaffold_10r: 25062096-25075228 Theobroma cacao
Thecc1EG045539 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 25065229-25075228 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838385 5264 Brassicales-Malvales View MSA
124322443 5266 SBM View MSA
124240779 5268 Malvidae View MSA
124073146 5270 Rosid View MSA
123736738 5271 Pentapetalae View MSA
122792658 5272 Eudicot View MSA
122050195 5273 Angiosperm View MSA
121345064 5274 Embryophyte View MSA
123426666 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain