Gene : Thecc1EG005983 T. cacao v1.1
Defline:  (1 of 82) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  26
Name:  ? Thecc1EG005983 Secondary Identifier:  ? PAC:27459630
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG005983 0.5kb upstream 0.5kb upstream 5895 true scaffold_2: 164558-170452 Theobroma cacao
Thecc1EG005983 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 169953-170452 Theobroma cacao
Thecc1EG005983 0.5kb downstream 0.5kb downstream 5895 true scaffold_2: 164058-169952 Theobroma cacao
Thecc1EG005983 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 164058-164557 Theobroma cacao
Thecc1EG005983 1.0kb upstream 1.0kb upstream 6395 true scaffold_2: 164558-170952 Theobroma cacao
Thecc1EG005983 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 169953-170952 Theobroma cacao
Thecc1EG005983 1.0kb downstream 1.0kb downstream 6395 true scaffold_2: 163558-169952 Theobroma cacao
Thecc1EG005983 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 163558-164557 Theobroma cacao
Thecc1EG005983 2.0kb upstream 2.0kb upstream 7395 true scaffold_2: 164558-171952 Theobroma cacao
Thecc1EG005983 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 169953-171952 Theobroma cacao
Thecc1EG005983 2.0kb downstream 2.0kb downstream 7395 true scaffold_2: 162558-169952 Theobroma cacao
Thecc1EG005983 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 162558-164557 Theobroma cacao
Thecc1EG005983 5.0kb upstream 5.0kb upstream 10395 true scaffold_2: 164558-174952 Theobroma cacao
Thecc1EG005983 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 169953-174952 Theobroma cacao
Thecc1EG005983 5.0kb downstream 5.0kb downstream 10395 true scaffold_2: 159558-169952 Theobroma cacao
Thecc1EG005983 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 159558-164557 Theobroma cacao
Thecc1EG005983 10.0kb upstream 10.0kb upstream 15395 true scaffold_2: 164558-179952 Theobroma cacao
Thecc1EG005983 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 169953-179952 Theobroma cacao
Thecc1EG005983 10.0kb downstream 10.0kb downstream 15395 true scaffold_2: 154558-169952 Theobroma cacao
Thecc1EG005983 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 154558-164557 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834289 5264 Brassicales-Malvales View MSA
124345164 5266 SBM View MSA
124241999 5268 Malvidae View MSA
124067797 5270 Rosid View MSA
123744746 5271 Pentapetalae View MSA
122794994 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain