Gene : Thecc1EG006171 T. cacao v1.1

Defline:  (1 of 2) PTHR22880//PTHR22880:SF174 - FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS // DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN Genomic Order:  177
Name:  ? Thecc1EG006171 Secondary Identifier:  ? PAC:27462467

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006171 0.5kb upstream 0.5kb upstream 4698 true scaffold_2: 1072074-1076771 Theobroma cacao
Thecc1EG006171 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1076272-1076771 Theobroma cacao
Thecc1EG006171 0.5kb downstream 0.5kb downstream 4698 true scaffold_2: 1071574-1076271 Theobroma cacao
Thecc1EG006171 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1071574-1072073 Theobroma cacao
Thecc1EG006171 1.0kb upstream 1.0kb upstream 5198 true scaffold_2: 1072074-1077271 Theobroma cacao
Thecc1EG006171 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1076272-1077271 Theobroma cacao
Thecc1EG006171 1.0kb downstream 1.0kb downstream 5198 true scaffold_2: 1071074-1076271 Theobroma cacao
Thecc1EG006171 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1071074-1072073 Theobroma cacao
Thecc1EG006171 2.0kb upstream 2.0kb upstream 6198 true scaffold_2: 1072074-1078271 Theobroma cacao
Thecc1EG006171 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1076272-1078271 Theobroma cacao
Thecc1EG006171 2.0kb downstream 2.0kb downstream 6198 true scaffold_2: 1070074-1076271 Theobroma cacao
Thecc1EG006171 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1070074-1072073 Theobroma cacao
Thecc1EG006171 5.0kb upstream 5.0kb upstream 9198 true scaffold_2: 1072074-1081271 Theobroma cacao
Thecc1EG006171 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1076272-1081271 Theobroma cacao
Thecc1EG006171 5.0kb downstream 5.0kb downstream 9198 true scaffold_2: 1067074-1076271 Theobroma cacao
Thecc1EG006171 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1067074-1072073 Theobroma cacao
Thecc1EG006171 10.0kb upstream 10.0kb upstream 14198 true scaffold_2: 1072074-1086271 Theobroma cacao
Thecc1EG006171 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1076272-1086271 Theobroma cacao
Thecc1EG006171 10.0kb downstream 10.0kb downstream 14198 true scaffold_2: 1062074-1076271 Theobroma cacao
Thecc1EG006171 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1062074-1072073 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833325 5264 Brassicales-Malvales View MSA
124346045 5266 SBM View MSA
124242647 5268 Malvidae View MSA
124069417 5270 Rosid View MSA
123752980 5271 Pentapetalae View MSA
122795275 5272 Eudicot View MSA
122044114 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121348064 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain