Gene : Thecc1EG006340 T. cacao v1.1
Defline:  Uncharacterized protein (70%P) Genomic Order:  320
Name:  ? Thecc1EG006340 Secondary Identifier:  ? PAC:27463600
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006340 0.5kb upstream 0.5kb upstream 3603 true scaffold_2: 1754863-1758465 Theobroma cacao
Thecc1EG006340 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 1757966-1758465 Theobroma cacao
Thecc1EG006340 0.5kb downstream 0.5kb downstream 3603 true scaffold_2: 1754363-1757965 Theobroma cacao
Thecc1EG006340 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 1754363-1754862 Theobroma cacao
Thecc1EG006340 1.0kb upstream 1.0kb upstream 4103 true scaffold_2: 1754863-1758965 Theobroma cacao
Thecc1EG006340 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 1757966-1758965 Theobroma cacao
Thecc1EG006340 1.0kb downstream 1.0kb downstream 4103 true scaffold_2: 1753863-1757965 Theobroma cacao
Thecc1EG006340 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 1753863-1754862 Theobroma cacao
Thecc1EG006340 2.0kb upstream 2.0kb upstream 5103 true scaffold_2: 1754863-1759965 Theobroma cacao
Thecc1EG006340 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 1757966-1759965 Theobroma cacao
Thecc1EG006340 2.0kb downstream 2.0kb downstream 5103 true scaffold_2: 1752863-1757965 Theobroma cacao
Thecc1EG006340 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 1752863-1754862 Theobroma cacao
Thecc1EG006340 5.0kb upstream 5.0kb upstream 8103 true scaffold_2: 1754863-1762965 Theobroma cacao
Thecc1EG006340 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 1757966-1762965 Theobroma cacao
Thecc1EG006340 5.0kb downstream 5.0kb downstream 8103 true scaffold_2: 1749863-1757965 Theobroma cacao
Thecc1EG006340 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 1749863-1754862 Theobroma cacao
Thecc1EG006340 10.0kb upstream 10.0kb upstream 13103 true scaffold_2: 1754863-1767965 Theobroma cacao
Thecc1EG006340 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 1757966-1767965 Theobroma cacao
Thecc1EG006340 10.0kb downstream 10.0kb downstream 13103 true scaffold_2: 1744863-1757965 Theobroma cacao
Thecc1EG006340 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 1744863-1754862 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825554 5264 Brassicales-Malvales View MSA
124320650 5266 SBM View MSA
124248309 5268 Malvidae View MSA
124071279 5270 Rosid View MSA
123741561 5271 Pentapetalae View MSA
122793729 5272 Eudicot View MSA
122046914 5273 Angiosperm View MSA
121346095 5274 Embryophyte View MSA
123380327 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain