Gene : Thecc1EG006479 T. cacao v1.1
Defline:  (1 of 1) K13506 - glycerol-3-phosphate O-acyltransferase 3/4 (GPAT3_4, AGPAT9, AGPAT6) Genomic Order:  448
Name:  ? Thecc1EG006479 Secondary Identifier:  ? PAC:27460024
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1319 Theobroma cacao pathologic  
Tcacao PWY4FS-7 Theobroma cacao pathologic  
Tcacao PWY-7411 Theobroma cacao pathologic  
Tcacao TRIGLSYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006479 0.5kb upstream 0.5kb upstream 5934 true scaffold_2: 2403106-2409039 Theobroma cacao
Thecc1EG006479 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2408540-2409039 Theobroma cacao
Thecc1EG006479 0.5kb downstream 0.5kb downstream 5934 true scaffold_2: 2402606-2408539 Theobroma cacao
Thecc1EG006479 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2402606-2403105 Theobroma cacao
Thecc1EG006479 1.0kb upstream 1.0kb upstream 6434 true scaffold_2: 2403106-2409539 Theobroma cacao
Thecc1EG006479 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2408540-2409539 Theobroma cacao
Thecc1EG006479 1.0kb downstream 1.0kb downstream 6434 true scaffold_2: 2402106-2408539 Theobroma cacao
Thecc1EG006479 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2402106-2403105 Theobroma cacao
Thecc1EG006479 2.0kb upstream 2.0kb upstream 7434 true scaffold_2: 2403106-2410539 Theobroma cacao
Thecc1EG006479 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2408540-2410539 Theobroma cacao
Thecc1EG006479 2.0kb downstream 2.0kb downstream 7434 true scaffold_2: 2401106-2408539 Theobroma cacao
Thecc1EG006479 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2401106-2403105 Theobroma cacao
Thecc1EG006479 5.0kb upstream 5.0kb upstream 10434 true scaffold_2: 2403106-2413539 Theobroma cacao
Thecc1EG006479 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2408540-2413539 Theobroma cacao
Thecc1EG006479 5.0kb downstream 5.0kb downstream 10434 true scaffold_2: 2398106-2408539 Theobroma cacao
Thecc1EG006479 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2398106-2403105 Theobroma cacao
Thecc1EG006479 10.0kb upstream 10.0kb upstream 15434 true scaffold_2: 2403106-2418539 Theobroma cacao
Thecc1EG006479 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2408540-2418539 Theobroma cacao
Thecc1EG006479 10.0kb downstream 10.0kb downstream 15434 true scaffold_2: 2393106-2408539 Theobroma cacao
Thecc1EG006479 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2393106-2403105 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831200 5264 Brassicales-Malvales View MSA
124336652 5266 SBM View MSA
124240700 5268 Malvidae View MSA
124065139 5270 Rosid View MSA
123751222 5271 Pentapetalae View MSA
122796143 5272 Eudicot View MSA
122045469 5273 Angiosperm View MSA
121344945 5274 Embryophyte View MSA
123427569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain