Gene : Thecc1EG006464 T. cacao v1.1

Defline:  (1 of 6) PF00646//PF03478 - F-box domain (F-box) // Protein of unknown function (DUF295) (DUF295) Genomic Order:  435
Name:  ? Thecc1EG006464 Secondary Identifier:  ? PAC:27463514

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006464 0.5kb upstream 0.5kb upstream 2039 true scaffold_2: 2345571-2347609 Theobroma cacao
Thecc1EG006464 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2347110-2347609 Theobroma cacao
Thecc1EG006464 0.5kb downstream 0.5kb downstream 2039 true scaffold_2: 2345071-2347109 Theobroma cacao
Thecc1EG006464 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2345071-2345570 Theobroma cacao
Thecc1EG006464 1.0kb upstream 1.0kb upstream 2539 true scaffold_2: 2345571-2348109 Theobroma cacao
Thecc1EG006464 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2347110-2348109 Theobroma cacao
Thecc1EG006464 1.0kb downstream 1.0kb downstream 2539 true scaffold_2: 2344571-2347109 Theobroma cacao
Thecc1EG006464 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2344571-2345570 Theobroma cacao
Thecc1EG006464 2.0kb upstream 2.0kb upstream 3539 true scaffold_2: 2345571-2349109 Theobroma cacao
Thecc1EG006464 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2347110-2349109 Theobroma cacao
Thecc1EG006464 2.0kb downstream 2.0kb downstream 3539 true scaffold_2: 2343571-2347109 Theobroma cacao
Thecc1EG006464 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2343571-2345570 Theobroma cacao
Thecc1EG006464 5.0kb upstream 5.0kb upstream 6539 true scaffold_2: 2345571-2352109 Theobroma cacao
Thecc1EG006464 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2347110-2352109 Theobroma cacao
Thecc1EG006464 5.0kb downstream 5.0kb downstream 6539 true scaffold_2: 2340571-2347109 Theobroma cacao
Thecc1EG006464 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2340571-2345570 Theobroma cacao
Thecc1EG006464 10.0kb upstream 10.0kb upstream 11539 true scaffold_2: 2345571-2357109 Theobroma cacao
Thecc1EG006464 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2347110-2357109 Theobroma cacao
Thecc1EG006464 10.0kb downstream 10.0kb downstream 11539 true scaffold_2: 2335571-2347109 Theobroma cacao
Thecc1EG006464 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2335571-2345570 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824096 5264 Brassicales-Malvales View MSA
124348992 5266 SBM View MSA
124246233 5268 Malvidae View MSA
124037419 5270 Rosid View MSA
123610312 5271 Pentapetalae View MSA
122644936 5272 Eudicot View MSA
122050591 5273 Angiosperm View MSA
121312011 5274 Embryophyte View MSA
123349228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain