Gene : Thecc1EG006653 T. cacao v1.1
Defline:  (1 of 2) PTHR31490:SF3 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  602
Name:  ? Thecc1EG006653 Secondary Identifier:  ? PAC:27459941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006653 0.5kb upstream 0.5kb upstream 4854 true scaffold_2: 3161807-3166660 Theobroma cacao
Thecc1EG006653 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3161807-3162306 Theobroma cacao
Thecc1EG006653 0.5kb downstream 0.5kb downstream 4854 true scaffold_2: 3162307-3167160 Theobroma cacao
Thecc1EG006653 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3166661-3167160 Theobroma cacao
Thecc1EG006653 1.0kb upstream 1.0kb upstream 5354 true scaffold_2: 3161307-3166660 Theobroma cacao
Thecc1EG006653 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3161307-3162306 Theobroma cacao
Thecc1EG006653 1.0kb downstream 1.0kb downstream 5354 true scaffold_2: 3162307-3167660 Theobroma cacao
Thecc1EG006653 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3166661-3167660 Theobroma cacao
Thecc1EG006653 2.0kb upstream 2.0kb upstream 6354 true scaffold_2: 3160307-3166660 Theobroma cacao
Thecc1EG006653 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3160307-3162306 Theobroma cacao
Thecc1EG006653 2.0kb downstream 2.0kb downstream 6354 true scaffold_2: 3162307-3168660 Theobroma cacao
Thecc1EG006653 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3166661-3168660 Theobroma cacao
Thecc1EG006653 5.0kb upstream 5.0kb upstream 9354 true scaffold_2: 3157307-3166660 Theobroma cacao
Thecc1EG006653 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3157307-3162306 Theobroma cacao
Thecc1EG006653 5.0kb downstream 5.0kb downstream 9354 true scaffold_2: 3162307-3171660 Theobroma cacao
Thecc1EG006653 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3166661-3171660 Theobroma cacao
Thecc1EG006653 10.0kb upstream 10.0kb upstream 14354 true scaffold_2: 3152307-3166660 Theobroma cacao
Thecc1EG006653 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3152307-3162306 Theobroma cacao
Thecc1EG006653 10.0kb downstream 10.0kb downstream 14354 true scaffold_2: 3162307-3176660 Theobroma cacao
Thecc1EG006653 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3166661-3176660 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839176 5264 Brassicales-Malvales View MSA
124341721 5266 SBM View MSA
124242747 5268 Malvidae View MSA
124067450 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain