Gene : Thecc1EG006806 T. cacao v1.1
Defline:  (1 of 1) PTHR10196:SF9 - XYLULOSE KINASE-RELATED Genomic Order:  739
Name:  ? Thecc1EG006806 Secondary Identifier:  ? PAC:27461470
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4261 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006806 0.5kb upstream 0.5kb upstream 4496 true scaffold_2: 3836850-3841345 Theobroma cacao
Thecc1EG006806 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3840846-3841345 Theobroma cacao
Thecc1EG006806 0.5kb downstream 0.5kb downstream 4496 true scaffold_2: 3836350-3840845 Theobroma cacao
Thecc1EG006806 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3836350-3836849 Theobroma cacao
Thecc1EG006806 1.0kb upstream 1.0kb upstream 4996 true scaffold_2: 3836850-3841845 Theobroma cacao
Thecc1EG006806 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3840846-3841845 Theobroma cacao
Thecc1EG006806 1.0kb downstream 1.0kb downstream 4996 true scaffold_2: 3835850-3840845 Theobroma cacao
Thecc1EG006806 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3835850-3836849 Theobroma cacao
Thecc1EG006806 2.0kb upstream 2.0kb upstream 5996 true scaffold_2: 3836850-3842845 Theobroma cacao
Thecc1EG006806 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3840846-3842845 Theobroma cacao
Thecc1EG006806 2.0kb downstream 2.0kb downstream 5996 true scaffold_2: 3834850-3840845 Theobroma cacao
Thecc1EG006806 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3834850-3836849 Theobroma cacao
Thecc1EG006806 5.0kb upstream 5.0kb upstream 8996 true scaffold_2: 3836850-3845845 Theobroma cacao
Thecc1EG006806 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3840846-3845845 Theobroma cacao
Thecc1EG006806 5.0kb downstream 5.0kb downstream 8996 true scaffold_2: 3831850-3840845 Theobroma cacao
Thecc1EG006806 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3831850-3836849 Theobroma cacao
Thecc1EG006806 10.0kb upstream 10.0kb upstream 13996 true scaffold_2: 3836850-3850845 Theobroma cacao
Thecc1EG006806 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3840846-3850845 Theobroma cacao
Thecc1EG006806 10.0kb downstream 10.0kb downstream 13996 true scaffold_2: 3826850-3840845 Theobroma cacao
Thecc1EG006806 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3826850-3836849 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837469 5264 Brassicales-Malvales View MSA
124337087 5266 SBM View MSA
124241604 5268 Malvidae View MSA
124062389 5270 Rosid View MSA
123737469 5271 Pentapetalae View MSA
122788278 5272 Eudicot View MSA
122044268 5273 Angiosperm View MSA
121310263 5274 Embryophyte View MSA
123425249 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain