Gene : Thecc1EG006773 T. cacao v1.1
Defline:  (1 of 2) K01583 - arginine decarboxylase (E4.1.1.19) Genomic Order:  711
Name:  ? Thecc1EG006773 Secondary Identifier:  ? PAC:27461487
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao POLYAMINSYN3-PWY Theobroma cacao pathologic  
Tcacao PWY-43 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006773 0.5kb upstream 0.5kb upstream 4075 true scaffold_2: 3670639-3674713 Theobroma cacao
Thecc1EG006773 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 3670639-3671138 Theobroma cacao
Thecc1EG006773 0.5kb downstream 0.5kb downstream 4075 true scaffold_2: 3671139-3675213 Theobroma cacao
Thecc1EG006773 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 3674714-3675213 Theobroma cacao
Thecc1EG006773 1.0kb upstream 1.0kb upstream 4575 true scaffold_2: 3670139-3674713 Theobroma cacao
Thecc1EG006773 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 3670139-3671138 Theobroma cacao
Thecc1EG006773 1.0kb downstream 1.0kb downstream 4575 true scaffold_2: 3671139-3675713 Theobroma cacao
Thecc1EG006773 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 3674714-3675713 Theobroma cacao
Thecc1EG006773 2.0kb upstream 2.0kb upstream 5575 true scaffold_2: 3669139-3674713 Theobroma cacao
Thecc1EG006773 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 3669139-3671138 Theobroma cacao
Thecc1EG006773 2.0kb downstream 2.0kb downstream 5575 true scaffold_2: 3671139-3676713 Theobroma cacao
Thecc1EG006773 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 3674714-3676713 Theobroma cacao
Thecc1EG006773 5.0kb upstream 5.0kb upstream 8575 true scaffold_2: 3666139-3674713 Theobroma cacao
Thecc1EG006773 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 3666139-3671138 Theobroma cacao
Thecc1EG006773 5.0kb downstream 5.0kb downstream 8575 true scaffold_2: 3671139-3679713 Theobroma cacao
Thecc1EG006773 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 3674714-3679713 Theobroma cacao
Thecc1EG006773 10.0kb upstream 10.0kb upstream 13575 true scaffold_2: 3661139-3674713 Theobroma cacao
Thecc1EG006773 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 3661139-3671138 Theobroma cacao
Thecc1EG006773 10.0kb downstream 10.0kb downstream 13575 true scaffold_2: 3671139-3684713 Theobroma cacao
Thecc1EG006773 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 3674714-3684713 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827460 5264 Brassicales-Malvales View MSA
124337522 5266 SBM View MSA
124242922 5268 Malvidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain