Gene : Thecc1EG006851 T. cacao v1.1
Defline:  (1 of 8) PF14364 - Domain of unknown function (DUF4408) (DUF4408) Genomic Order:  780
Name:  ? Thecc1EG006851 Secondary Identifier:  ? PAC:27461133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006851 0.5kb upstream 0.5kb upstream 5299 true scaffold_2: 4117625-4122923 Theobroma cacao
Thecc1EG006851 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4122424-4122923 Theobroma cacao
Thecc1EG006851 0.5kb downstream 0.5kb downstream 5299 true scaffold_2: 4117125-4122423 Theobroma cacao
Thecc1EG006851 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4117125-4117624 Theobroma cacao
Thecc1EG006851 1.0kb upstream 1.0kb upstream 5799 true scaffold_2: 4117625-4123423 Theobroma cacao
Thecc1EG006851 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4122424-4123423 Theobroma cacao
Thecc1EG006851 1.0kb downstream 1.0kb downstream 5799 true scaffold_2: 4116625-4122423 Theobroma cacao
Thecc1EG006851 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4116625-4117624 Theobroma cacao
Thecc1EG006851 2.0kb upstream 2.0kb upstream 6799 true scaffold_2: 4117625-4124423 Theobroma cacao
Thecc1EG006851 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4122424-4124423 Theobroma cacao
Thecc1EG006851 2.0kb downstream 2.0kb downstream 6799 true scaffold_2: 4115625-4122423 Theobroma cacao
Thecc1EG006851 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4115625-4117624 Theobroma cacao
Thecc1EG006851 5.0kb upstream 5.0kb upstream 9799 true scaffold_2: 4117625-4127423 Theobroma cacao
Thecc1EG006851 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4122424-4127423 Theobroma cacao
Thecc1EG006851 5.0kb downstream 5.0kb downstream 9799 true scaffold_2: 4112625-4122423 Theobroma cacao
Thecc1EG006851 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4112625-4117624 Theobroma cacao
Thecc1EG006851 10.0kb upstream 10.0kb upstream 14799 true scaffold_2: 4117625-4132423 Theobroma cacao
Thecc1EG006851 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4122424-4132423 Theobroma cacao
Thecc1EG006851 10.0kb downstream 10.0kb downstream 14799 true scaffold_2: 4107625-4122423 Theobroma cacao
Thecc1EG006851 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4107625-4117624 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839471 5264 Brassicales-Malvales View MSA
124345018 5266 SBM View MSA
124241724 5268 Malvidae View MSA
124074138 5270 Rosid View MSA
123749937 5271 Pentapetalae View MSA
122792999 5272 Eudicot View MSA
122042966 5273 Angiosperm View MSA
121310057 5274 Embryophyte View MSA
123347654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain