Gene : Thecc1EG007000 T. cacao v1.1
Defline:  (1 of 1) PTHR22792//PTHR22792:SF62 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 6C Genomic Order:  917
Name:  ? Thecc1EG007000 Secondary Identifier:  ? PAC:27464644
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007000 0.5kb upstream 0.5kb upstream 5779 true scaffold_2: 4788062-4793840 Theobroma cacao
Thecc1EG007000 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4788062-4788561 Theobroma cacao
Thecc1EG007000 0.5kb downstream 0.5kb downstream 5779 true scaffold_2: 4788562-4794340 Theobroma cacao
Thecc1EG007000 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4793841-4794340 Theobroma cacao
Thecc1EG007000 1.0kb upstream 1.0kb upstream 6279 true scaffold_2: 4787562-4793840 Theobroma cacao
Thecc1EG007000 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4787562-4788561 Theobroma cacao
Thecc1EG007000 1.0kb downstream 1.0kb downstream 6279 true scaffold_2: 4788562-4794840 Theobroma cacao
Thecc1EG007000 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4793841-4794840 Theobroma cacao
Thecc1EG007000 2.0kb upstream 2.0kb upstream 7279 true scaffold_2: 4786562-4793840 Theobroma cacao
Thecc1EG007000 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4786562-4788561 Theobroma cacao
Thecc1EG007000 2.0kb downstream 2.0kb downstream 7279 true scaffold_2: 4788562-4795840 Theobroma cacao
Thecc1EG007000 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4793841-4795840 Theobroma cacao
Thecc1EG007000 5.0kb upstream 5.0kb upstream 10279 true scaffold_2: 4783562-4793840 Theobroma cacao
Thecc1EG007000 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4783562-4788561 Theobroma cacao
Thecc1EG007000 5.0kb downstream 5.0kb downstream 10279 true scaffold_2: 4788562-4798840 Theobroma cacao
Thecc1EG007000 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4793841-4798840 Theobroma cacao
Thecc1EG007000 10.0kb upstream 10.0kb upstream 15279 true scaffold_2: 4778562-4793840 Theobroma cacao
Thecc1EG007000 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4778562-4788561 Theobroma cacao
Thecc1EG007000 10.0kb downstream 10.0kb downstream 15279 true scaffold_2: 4788562-4803840 Theobroma cacao
Thecc1EG007000 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4793841-4803840 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839749 5264 Brassicales-Malvales View MSA
124342465 5266 SBM View MSA
124254424 5268 Malvidae View MSA
124067915 5270 Rosid View MSA
123749419 5271 Pentapetalae View MSA
122785801 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain