Gene : Thecc1EG006938 T. cacao v1.1

Defline:  (1 of 1) PTHR19370//PTHR19370:SF120 - NADH-CYTOCHROME B5 REDUCTASE // FERREDOXIN-1, CHLOROPLASTIC-RELATED Genomic Order:  858
Name:  ? Thecc1EG006938 Secondary Identifier:  ? PAC:27461105

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG006938 0.5kb upstream 0.5kb upstream 1312 true scaffold_2: 4564251-4565562 Theobroma cacao
Thecc1EG006938 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 4564251-4564750 Theobroma cacao
Thecc1EG006938 0.5kb downstream 0.5kb downstream 1312 true scaffold_2: 4564751-4566062 Theobroma cacao
Thecc1EG006938 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 4565563-4566062 Theobroma cacao
Thecc1EG006938 1.0kb upstream 1.0kb upstream 1812 true scaffold_2: 4563751-4565562 Theobroma cacao
Thecc1EG006938 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 4563751-4564750 Theobroma cacao
Thecc1EG006938 1.0kb downstream 1.0kb downstream 1812 true scaffold_2: 4564751-4566562 Theobroma cacao
Thecc1EG006938 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 4565563-4566562 Theobroma cacao
Thecc1EG006938 2.0kb upstream 2.0kb upstream 2812 true scaffold_2: 4562751-4565562 Theobroma cacao
Thecc1EG006938 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 4562751-4564750 Theobroma cacao
Thecc1EG006938 2.0kb downstream 2.0kb downstream 2812 true scaffold_2: 4564751-4567562 Theobroma cacao
Thecc1EG006938 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 4565563-4567562 Theobroma cacao
Thecc1EG006938 5.0kb upstream 5.0kb upstream 5812 true scaffold_2: 4559751-4565562 Theobroma cacao
Thecc1EG006938 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 4559751-4564750 Theobroma cacao
Thecc1EG006938 5.0kb downstream 5.0kb downstream 5812 true scaffold_2: 4564751-4570562 Theobroma cacao
Thecc1EG006938 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 4565563-4570562 Theobroma cacao
Thecc1EG006938 10.0kb upstream 10.0kb upstream 10812 true scaffold_2: 4554751-4565562 Theobroma cacao
Thecc1EG006938 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 4554751-4564750 Theobroma cacao
Thecc1EG006938 10.0kb downstream 10.0kb downstream 10812 true scaffold_2: 4564751-4575562 Theobroma cacao
Thecc1EG006938 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 4565563-4575562 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837584 5264 Brassicales-Malvales View MSA
124351499 5266 SBM View MSA
124253066 5268 Malvidae View MSA
124069185 5270 Rosid View MSA
123748540 5271 Pentapetalae View MSA
122797784 5272 Eudicot View MSA
122047463 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121350651 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain