Gene : Thecc1EG007210 T. cacao v1.1
Defline:  (1 of 1) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Genomic Order:  1103
Name:  ? Thecc1EG007210 Secondary Identifier:  ? PAC:27460988
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007210 0.5kb upstream 0.5kb upstream 9004 true scaffold_2: 5800782-5809785 Theobroma cacao
Thecc1EG007210 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5800782-5801281 Theobroma cacao
Thecc1EG007210 0.5kb downstream 0.5kb downstream 9004 true scaffold_2: 5801282-5810285 Theobroma cacao
Thecc1EG007210 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5809786-5810285 Theobroma cacao
Thecc1EG007210 1.0kb upstream 1.0kb upstream 9504 true scaffold_2: 5800282-5809785 Theobroma cacao
Thecc1EG007210 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5800282-5801281 Theobroma cacao
Thecc1EG007210 1.0kb downstream 1.0kb downstream 9504 true scaffold_2: 5801282-5810785 Theobroma cacao
Thecc1EG007210 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5809786-5810785 Theobroma cacao
Thecc1EG007210 2.0kb upstream 2.0kb upstream 10504 true scaffold_2: 5799282-5809785 Theobroma cacao
Thecc1EG007210 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5799282-5801281 Theobroma cacao
Thecc1EG007210 2.0kb downstream 2.0kb downstream 10504 true scaffold_2: 5801282-5811785 Theobroma cacao
Thecc1EG007210 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5809786-5811785 Theobroma cacao
Thecc1EG007210 5.0kb upstream 5.0kb upstream 13504 true scaffold_2: 5796282-5809785 Theobroma cacao
Thecc1EG007210 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5796282-5801281 Theobroma cacao
Thecc1EG007210 5.0kb downstream 5.0kb downstream 13504 true scaffold_2: 5801282-5814785 Theobroma cacao
Thecc1EG007210 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5809786-5814785 Theobroma cacao
Thecc1EG007210 10.0kb upstream 10.0kb upstream 18504 true scaffold_2: 5791282-5809785 Theobroma cacao
Thecc1EG007210 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5791282-5801281 Theobroma cacao
Thecc1EG007210 10.0kb downstream 10.0kb downstream 18504 true scaffold_2: 5801282-5819785 Theobroma cacao
Thecc1EG007210 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5809786-5819785 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829280 5264 Brassicales-Malvales View MSA
124338118 5266 SBM View MSA
124254505 5268 Malvidae View MSA
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain