Gene : Thecc1EG007096 T. cacao v1.1
Defline:  (1 of 10) K13126 - polyadenylate-binding protein (PABPC) Genomic Order:  999
Name:  ? Thecc1EG007096 Secondary Identifier:  ? PAC:27463270
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007096 0.5kb upstream 0.5kb upstream 5465 true scaffold_2: 5274347-5279811 Theobroma cacao
Thecc1EG007096 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5279312-5279811 Theobroma cacao
Thecc1EG007096 0.5kb downstream 0.5kb downstream 5465 true scaffold_2: 5273847-5279311 Theobroma cacao
Thecc1EG007096 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5273847-5274346 Theobroma cacao
Thecc1EG007096 1.0kb upstream 1.0kb upstream 5965 true scaffold_2: 5274347-5280311 Theobroma cacao
Thecc1EG007096 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5279312-5280311 Theobroma cacao
Thecc1EG007096 1.0kb downstream 1.0kb downstream 5965 true scaffold_2: 5273347-5279311 Theobroma cacao
Thecc1EG007096 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5273347-5274346 Theobroma cacao
Thecc1EG007096 2.0kb upstream 2.0kb upstream 6965 true scaffold_2: 5274347-5281311 Theobroma cacao
Thecc1EG007096 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5279312-5281311 Theobroma cacao
Thecc1EG007096 2.0kb downstream 2.0kb downstream 6965 true scaffold_2: 5272347-5279311 Theobroma cacao
Thecc1EG007096 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5272347-5274346 Theobroma cacao
Thecc1EG007096 5.0kb upstream 5.0kb upstream 9965 true scaffold_2: 5274347-5284311 Theobroma cacao
Thecc1EG007096 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5279312-5284311 Theobroma cacao
Thecc1EG007096 5.0kb downstream 5.0kb downstream 9965 true scaffold_2: 5269347-5279311 Theobroma cacao
Thecc1EG007096 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5269347-5274346 Theobroma cacao
Thecc1EG007096 10.0kb upstream 10.0kb upstream 14965 true scaffold_2: 5274347-5289311 Theobroma cacao
Thecc1EG007096 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5279312-5289311 Theobroma cacao
Thecc1EG007096 10.0kb downstream 10.0kb downstream 14965 true scaffold_2: 5264347-5279311 Theobroma cacao
Thecc1EG007096 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5264347-5274346 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841459 5264 Brassicales-Malvales View MSA
124345367 5266 SBM View MSA
124249647 5268 Malvidae View MSA
124070544 5270 Rosid View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain