Gene : Thecc1EG007088 T. cacao v1.1
Defline:  (1 of 1) PTHR10509//PTHR10509:SF23 - O-METHYLTRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  992
Name:  ? Thecc1EG007088 Secondary Identifier:  ? PAC:27464286
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1121 Theobroma cacao pathologic  
Tcacao PWY-361 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007088 0.5kb upstream 0.5kb upstream 2452 true scaffold_2: 5223764-5226215 Theobroma cacao
Thecc1EG007088 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 5223764-5224263 Theobroma cacao
Thecc1EG007088 0.5kb downstream 0.5kb downstream 2452 true scaffold_2: 5224264-5226715 Theobroma cacao
Thecc1EG007088 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 5226216-5226715 Theobroma cacao
Thecc1EG007088 1.0kb upstream 1.0kb upstream 2952 true scaffold_2: 5223264-5226215 Theobroma cacao
Thecc1EG007088 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 5223264-5224263 Theobroma cacao
Thecc1EG007088 1.0kb downstream 1.0kb downstream 2952 true scaffold_2: 5224264-5227215 Theobroma cacao
Thecc1EG007088 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 5226216-5227215 Theobroma cacao
Thecc1EG007088 2.0kb upstream 2.0kb upstream 3952 true scaffold_2: 5222264-5226215 Theobroma cacao
Thecc1EG007088 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 5222264-5224263 Theobroma cacao
Thecc1EG007088 2.0kb downstream 2.0kb downstream 3952 true scaffold_2: 5224264-5228215 Theobroma cacao
Thecc1EG007088 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 5226216-5228215 Theobroma cacao
Thecc1EG007088 5.0kb upstream 5.0kb upstream 6952 true scaffold_2: 5219264-5226215 Theobroma cacao
Thecc1EG007088 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 5219264-5224263 Theobroma cacao
Thecc1EG007088 5.0kb downstream 5.0kb downstream 6952 true scaffold_2: 5224264-5231215 Theobroma cacao
Thecc1EG007088 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 5226216-5231215 Theobroma cacao
Thecc1EG007088 10.0kb upstream 10.0kb upstream 11952 true scaffold_2: 5214264-5226215 Theobroma cacao
Thecc1EG007088 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 5214264-5224263 Theobroma cacao
Thecc1EG007088 10.0kb downstream 10.0kb downstream 11952 true scaffold_2: 5224264-5236215 Theobroma cacao
Thecc1EG007088 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 5226216-5236215 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839836 5264 Brassicales-Malvales View MSA
124344783 5266 SBM View MSA
124253255 5268 Malvidae View MSA
124070061 5270 Rosid View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain