Gene : Thecc1EG007295 T. cacao v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF60 - HVA22-LIKE PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1180
Name:  ? Thecc1EG007295 Secondary Identifier:  ? PAC:27462079
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007295 0.5kb upstream 0.5kb upstream 3593 true scaffold_2: 6221473-6225065 Theobroma cacao
Thecc1EG007295 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6224566-6225065 Theobroma cacao
Thecc1EG007295 0.5kb downstream 0.5kb downstream 3593 true scaffold_2: 6220973-6224565 Theobroma cacao
Thecc1EG007295 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6220973-6221472 Theobroma cacao
Thecc1EG007295 1.0kb upstream 1.0kb upstream 4093 true scaffold_2: 6221473-6225565 Theobroma cacao
Thecc1EG007295 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6224566-6225565 Theobroma cacao
Thecc1EG007295 1.0kb downstream 1.0kb downstream 4093 true scaffold_2: 6220473-6224565 Theobroma cacao
Thecc1EG007295 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6220473-6221472 Theobroma cacao
Thecc1EG007295 2.0kb upstream 2.0kb upstream 5093 true scaffold_2: 6221473-6226565 Theobroma cacao
Thecc1EG007295 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6224566-6226565 Theobroma cacao
Thecc1EG007295 2.0kb downstream 2.0kb downstream 5093 true scaffold_2: 6219473-6224565 Theobroma cacao
Thecc1EG007295 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6219473-6221472 Theobroma cacao
Thecc1EG007295 5.0kb upstream 5.0kb upstream 8093 true scaffold_2: 6221473-6229565 Theobroma cacao
Thecc1EG007295 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6224566-6229565 Theobroma cacao
Thecc1EG007295 5.0kb downstream 5.0kb downstream 8093 true scaffold_2: 6216473-6224565 Theobroma cacao
Thecc1EG007295 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6216473-6221472 Theobroma cacao
Thecc1EG007295 10.0kb upstream 10.0kb upstream 13093 true scaffold_2: 6221473-6234565 Theobroma cacao
Thecc1EG007295 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6224566-6234565 Theobroma cacao
Thecc1EG007295 10.0kb downstream 10.0kb downstream 13093 true scaffold_2: 6211473-6224565 Theobroma cacao
Thecc1EG007295 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6211473-6221472 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837051 5264 Brassicales-Malvales View MSA
124341936 5266 SBM View MSA
124253444 5268 Malvidae View MSA
124070048 5270 Rosid View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain