Gene : Thecc1EG007426 T. cacao v1.1

Defline:  (1 of 3) PF04791 - LMBR1-like membrane protein (LMBR1) Genomic Order:  1288
Name:  ? Thecc1EG007426 Secondary Identifier:  ? PAC:27459840

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007426 0.5kb upstream 0.5kb upstream 8864 true scaffold_2: 6898729-6907592 Theobroma cacao
Thecc1EG007426 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 6907093-6907592 Theobroma cacao
Thecc1EG007426 0.5kb downstream 0.5kb downstream 8864 true scaffold_2: 6898229-6907092 Theobroma cacao
Thecc1EG007426 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 6898229-6898728 Theobroma cacao
Thecc1EG007426 1.0kb upstream 1.0kb upstream 9364 true scaffold_2: 6898729-6908092 Theobroma cacao
Thecc1EG007426 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 6907093-6908092 Theobroma cacao
Thecc1EG007426 1.0kb downstream 1.0kb downstream 9364 true scaffold_2: 6897729-6907092 Theobroma cacao
Thecc1EG007426 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 6897729-6898728 Theobroma cacao
Thecc1EG007426 2.0kb upstream 2.0kb upstream 10364 true scaffold_2: 6898729-6909092 Theobroma cacao
Thecc1EG007426 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 6907093-6909092 Theobroma cacao
Thecc1EG007426 2.0kb downstream 2.0kb downstream 10364 true scaffold_2: 6896729-6907092 Theobroma cacao
Thecc1EG007426 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 6896729-6898728 Theobroma cacao
Thecc1EG007426 5.0kb upstream 5.0kb upstream 13364 true scaffold_2: 6898729-6912092 Theobroma cacao
Thecc1EG007426 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 6907093-6912092 Theobroma cacao
Thecc1EG007426 5.0kb downstream 5.0kb downstream 13364 true scaffold_2: 6893729-6907092 Theobroma cacao
Thecc1EG007426 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 6893729-6898728 Theobroma cacao
Thecc1EG007426 10.0kb upstream 10.0kb upstream 18364 true scaffold_2: 6898729-6917092 Theobroma cacao
Thecc1EG007426 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 6907093-6917092 Theobroma cacao
Thecc1EG007426 10.0kb downstream 10.0kb downstream 18364 true scaffold_2: 6888729-6907092 Theobroma cacao
Thecc1EG007426 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 6888729-6898728 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825474 5264 Brassicales-Malvales View MSA
124320621 5266 SBM View MSA
124168708 5268 Malvidae View MSA
123892020 5270 Rosid View MSA
123751188 5271 Pentapetalae View MSA
122786187 5272 Eudicot View MSA
122043749 5273 Angiosperm View MSA
121346120 5274 Embryophyte View MSA
123425964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain