Gene : Thecc1EG007575 T. cacao v1.1
Defline:  (1 of 1) 2.7.1.39 - Homoserine kinase Genomic Order:  1404
Name:  ? Thecc1EG007575 Secondary Identifier:  ? PAC:27459812
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao HOMOSER-THRESYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3001 Theobroma cacao pathologic  
Tcacao PWY-702 Theobroma cacao pathologic  
Tcacao PWY-724 Theobroma cacao pathologic  
Tcacao THRESYN-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007575 0.5kb upstream 0.5kb upstream 2200 true scaffold_2: 7738426-7740625 Theobroma cacao
Thecc1EG007575 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 7738426-7738925 Theobroma cacao
Thecc1EG007575 0.5kb downstream 0.5kb downstream 2200 true scaffold_2: 7738926-7741125 Theobroma cacao
Thecc1EG007575 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 7740626-7741125 Theobroma cacao
Thecc1EG007575 1.0kb upstream 1.0kb upstream 2700 true scaffold_2: 7737926-7740625 Theobroma cacao
Thecc1EG007575 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 7737926-7738925 Theobroma cacao
Thecc1EG007575 1.0kb downstream 1.0kb downstream 2700 true scaffold_2: 7738926-7741625 Theobroma cacao
Thecc1EG007575 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 7740626-7741625 Theobroma cacao
Thecc1EG007575 2.0kb upstream 2.0kb upstream 3700 true scaffold_2: 7736926-7740625 Theobroma cacao
Thecc1EG007575 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 7736926-7738925 Theobroma cacao
Thecc1EG007575 2.0kb downstream 2.0kb downstream 3700 true scaffold_2: 7738926-7742625 Theobroma cacao
Thecc1EG007575 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 7740626-7742625 Theobroma cacao
Thecc1EG007575 5.0kb upstream 5.0kb upstream 6700 true scaffold_2: 7733926-7740625 Theobroma cacao
Thecc1EG007575 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 7733926-7738925 Theobroma cacao
Thecc1EG007575 5.0kb downstream 5.0kb downstream 6700 true scaffold_2: 7738926-7745625 Theobroma cacao
Thecc1EG007575 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 7740626-7745625 Theobroma cacao
Thecc1EG007575 10.0kb upstream 10.0kb upstream 11700 true scaffold_2: 7728926-7740625 Theobroma cacao
Thecc1EG007575 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 7728926-7738925 Theobroma cacao
Thecc1EG007575 10.0kb downstream 10.0kb downstream 11700 true scaffold_2: 7738926-7750625 Theobroma cacao
Thecc1EG007575 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 7740626-7750625 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832058 5264 Brassicales-Malvales View MSA
124343868 5266 SBM View MSA
124249755 5268 Malvidae View MSA
124063769 5270 Rosid View MSA
123740380 5271 Pentapetalae View MSA
122792807 5272 Eudicot View MSA
122044756 5273 Angiosperm View MSA
121343956 5274 Embryophyte View MSA
123424273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain