Gene : Thecc1EG007687 T. cacao v1.1
Defline:  (1 of 1) PTHR11404//PTHR11404:SF17 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  1497
Name:  ? Thecc1EG007687 Secondary Identifier:  ? PAC:27462778
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao DETOX1-PWY Theobroma cacao pathologic  
Tcacao DETOX1-PWY-1 Theobroma cacao pathologic  
Tcacao PWY-6854 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007687 0.5kb upstream 0.5kb upstream 35059 true scaffold_2: 8343665-8378723 Theobroma cacao
Thecc1EG007687 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 8378224-8378723 Theobroma cacao
Thecc1EG007687 0.5kb downstream 0.5kb downstream 35059 true scaffold_2: 8343165-8378223 Theobroma cacao
Thecc1EG007687 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 8343165-8343664 Theobroma cacao
Thecc1EG007687 1.0kb upstream 1.0kb upstream 35559 true scaffold_2: 8343665-8379223 Theobroma cacao
Thecc1EG007687 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 8378224-8379223 Theobroma cacao
Thecc1EG007687 1.0kb downstream 1.0kb downstream 35559 true scaffold_2: 8342665-8378223 Theobroma cacao
Thecc1EG007687 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 8342665-8343664 Theobroma cacao
Thecc1EG007687 2.0kb upstream 2.0kb upstream 36559 true scaffold_2: 8343665-8380223 Theobroma cacao
Thecc1EG007687 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 8378224-8380223 Theobroma cacao
Thecc1EG007687 2.0kb downstream 2.0kb downstream 36559 true scaffold_2: 8341665-8378223 Theobroma cacao
Thecc1EG007687 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 8341665-8343664 Theobroma cacao
Thecc1EG007687 5.0kb upstream 5.0kb upstream 39559 true scaffold_2: 8343665-8383223 Theobroma cacao
Thecc1EG007687 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 8378224-8383223 Theobroma cacao
Thecc1EG007687 5.0kb downstream 5.0kb downstream 39559 true scaffold_2: 8338665-8378223 Theobroma cacao
Thecc1EG007687 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 8338665-8343664 Theobroma cacao
Thecc1EG007687 10.0kb upstream 10.0kb upstream 44559 true scaffold_2: 8343665-8388223 Theobroma cacao
Thecc1EG007687 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 8378224-8388223 Theobroma cacao
Thecc1EG007687 10.0kb downstream 10.0kb downstream 44559 true scaffold_2: 8333665-8378223 Theobroma cacao
Thecc1EG007687 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 8333665-8343664 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828230 5264 Brassicales-Malvales View MSA
124345837 5266 SBM View MSA
124242563 5268 Malvidae View MSA
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain