Gene : Thecc1EG008101 T. cacao v1.1
Defline:  (1 of 2) PTHR31533:SF2 - GPI-ANCHORED PROTEIN LORELEI-RELATED Genomic Order:  1742
Name:  ? Thecc1EG008101 Secondary Identifier:  ? PAC:27463045
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008101 0.5kb upstream 0.5kb upstream 2295 true scaffold_2: 11096943-11099237 Theobroma cacao
Thecc1EG008101 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11096943-11097442 Theobroma cacao
Thecc1EG008101 0.5kb downstream 0.5kb downstream 2295 true scaffold_2: 11097443-11099737 Theobroma cacao
Thecc1EG008101 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11099238-11099737 Theobroma cacao
Thecc1EG008101 1.0kb upstream 1.0kb upstream 2795 true scaffold_2: 11096443-11099237 Theobroma cacao
Thecc1EG008101 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11096443-11097442 Theobroma cacao
Thecc1EG008101 1.0kb downstream 1.0kb downstream 2795 true scaffold_2: 11097443-11100237 Theobroma cacao
Thecc1EG008101 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11099238-11100237 Theobroma cacao
Thecc1EG008101 2.0kb upstream 2.0kb upstream 3795 true scaffold_2: 11095443-11099237 Theobroma cacao
Thecc1EG008101 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11095443-11097442 Theobroma cacao
Thecc1EG008101 2.0kb downstream 2.0kb downstream 3795 true scaffold_2: 11097443-11101237 Theobroma cacao
Thecc1EG008101 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11099238-11101237 Theobroma cacao
Thecc1EG008101 5.0kb upstream 5.0kb upstream 6795 true scaffold_2: 11092443-11099237 Theobroma cacao
Thecc1EG008101 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11092443-11097442 Theobroma cacao
Thecc1EG008101 5.0kb downstream 5.0kb downstream 6795 true scaffold_2: 11097443-11104237 Theobroma cacao
Thecc1EG008101 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11099238-11104237 Theobroma cacao
Thecc1EG008101 10.0kb upstream 10.0kb upstream 11795 true scaffold_2: 11087443-11099237 Theobroma cacao
Thecc1EG008101 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11087443-11097442 Theobroma cacao
Thecc1EG008101 10.0kb downstream 10.0kb downstream 11795 true scaffold_2: 11097443-11109237 Theobroma cacao
Thecc1EG008101 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11099238-11109237 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839590 5264 Brassicales-Malvales View MSA
124322624 5266 SBM View MSA
124247827 5268 Malvidae View MSA
124072750 5270 Rosid View MSA
123750989 5271 Pentapetalae View MSA
122787745 5272 Eudicot View MSA
122045868 5273 Angiosperm View MSA
121350043 5274 Embryophyte View MSA
123381553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain