Gene : Thecc1EG008116 T. cacao v1.1
Defline:  (1 of 1) PTHR31451//PTHR31451:SF1 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  1753
Name:  ? Thecc1EG008116 Secondary Identifier:  ? PAC:27460597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008116 0.5kb upstream 0.5kb upstream 5630 true scaffold_2: 11195426-11201055 Theobroma cacao
Thecc1EG008116 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11200556-11201055 Theobroma cacao
Thecc1EG008116 0.5kb downstream 0.5kb downstream 5630 true scaffold_2: 11194926-11200555 Theobroma cacao
Thecc1EG008116 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11194926-11195425 Theobroma cacao
Thecc1EG008116 1.0kb upstream 1.0kb upstream 6130 true scaffold_2: 11195426-11201555 Theobroma cacao
Thecc1EG008116 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11200556-11201555 Theobroma cacao
Thecc1EG008116 1.0kb downstream 1.0kb downstream 6130 true scaffold_2: 11194426-11200555 Theobroma cacao
Thecc1EG008116 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11194426-11195425 Theobroma cacao
Thecc1EG008116 2.0kb upstream 2.0kb upstream 7130 true scaffold_2: 11195426-11202555 Theobroma cacao
Thecc1EG008116 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11200556-11202555 Theobroma cacao
Thecc1EG008116 2.0kb downstream 2.0kb downstream 7130 true scaffold_2: 11193426-11200555 Theobroma cacao
Thecc1EG008116 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11193426-11195425 Theobroma cacao
Thecc1EG008116 5.0kb upstream 5.0kb upstream 10130 true scaffold_2: 11195426-11205555 Theobroma cacao
Thecc1EG008116 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11200556-11205555 Theobroma cacao
Thecc1EG008116 5.0kb downstream 5.0kb downstream 10130 true scaffold_2: 11190426-11200555 Theobroma cacao
Thecc1EG008116 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11190426-11195425 Theobroma cacao
Thecc1EG008116 10.0kb upstream 10.0kb upstream 15130 true scaffold_2: 11195426-11210555 Theobroma cacao
Thecc1EG008116 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11200556-11210555 Theobroma cacao
Thecc1EG008116 10.0kb downstream 10.0kb downstream 15130 true scaffold_2: 11185426-11200555 Theobroma cacao
Thecc1EG008116 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11185426-11195425 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836398 5264 Brassicales-Malvales View MSA
124336638 5266 SBM View MSA
124250952 5268 Malvidae View MSA
124068512 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain