Gene : Thecc1EG007889 T. cacao v1.1
Defline:  (1 of 1) PTHR11999//PTHR11999:SF93 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE // SUBFAMILY NOT NAMED Genomic Order:  1631
Name:  ? Thecc1EG007889 Secondary Identifier:  ? PAC:27460115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6030 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007889 0.5kb upstream 0.5kb upstream 25416 true scaffold_2: 9742114-9767529 Theobroma cacao
Thecc1EG007889 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9767030-9767529 Theobroma cacao
Thecc1EG007889 0.5kb downstream 0.5kb downstream 25416 true scaffold_2: 9741614-9767029 Theobroma cacao
Thecc1EG007889 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9741614-9742113 Theobroma cacao
Thecc1EG007889 1.0kb upstream 1.0kb upstream 25916 true scaffold_2: 9742114-9768029 Theobroma cacao
Thecc1EG007889 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9767030-9768029 Theobroma cacao
Thecc1EG007889 1.0kb downstream 1.0kb downstream 25916 true scaffold_2: 9741114-9767029 Theobroma cacao
Thecc1EG007889 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9741114-9742113 Theobroma cacao
Thecc1EG007889 2.0kb upstream 2.0kb upstream 26916 true scaffold_2: 9742114-9769029 Theobroma cacao
Thecc1EG007889 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9767030-9769029 Theobroma cacao
Thecc1EG007889 2.0kb downstream 2.0kb downstream 26916 true scaffold_2: 9740114-9767029 Theobroma cacao
Thecc1EG007889 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9740114-9742113 Theobroma cacao
Thecc1EG007889 5.0kb upstream 5.0kb upstream 29916 true scaffold_2: 9742114-9772029 Theobroma cacao
Thecc1EG007889 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9767030-9772029 Theobroma cacao
Thecc1EG007889 5.0kb downstream 5.0kb downstream 29916 true scaffold_2: 9737114-9767029 Theobroma cacao
Thecc1EG007889 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9737114-9742113 Theobroma cacao
Thecc1EG007889 10.0kb upstream 10.0kb upstream 34916 true scaffold_2: 9742114-9777029 Theobroma cacao
Thecc1EG007889 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9767030-9777029 Theobroma cacao
Thecc1EG007889 10.0kb downstream 10.0kb downstream 34916 true scaffold_2: 9732114-9767029 Theobroma cacao
Thecc1EG007889 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9732114-9742113 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826304 5264 Brassicales-Malvales View MSA
124349489 5266 SBM View MSA
124253031 5268 Malvidae View MSA
124071819 5270 Rosid View MSA
123753365 5271 Pentapetalae View MSA
122794689 5272 Eudicot View MSA
122049990 5273 Angiosperm View MSA
121346874 5274 Embryophyte View MSA
123423954 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain