Gene : Thecc1EG007877 T. cacao v1.1
Defline:  (1 of 1) K02636 - cytochrome b6-f complex iron-sulfur subunit (petC) Genomic Order:  1627
Name:  ? Thecc1EG007877 Secondary Identifier:  ? PAC:27461725
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-101 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG007877 0.5kb upstream 0.5kb upstream 4689 true scaffold_2: 9656308-9660996 Theobroma cacao
Thecc1EG007877 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9656308-9656807 Theobroma cacao
Thecc1EG007877 0.5kb downstream 0.5kb downstream 4689 true scaffold_2: 9656808-9661496 Theobroma cacao
Thecc1EG007877 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9660997-9661496 Theobroma cacao
Thecc1EG007877 1.0kb upstream 1.0kb upstream 5189 true scaffold_2: 9655808-9660996 Theobroma cacao
Thecc1EG007877 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9655808-9656807 Theobroma cacao
Thecc1EG007877 1.0kb downstream 1.0kb downstream 5189 true scaffold_2: 9656808-9661996 Theobroma cacao
Thecc1EG007877 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9660997-9661996 Theobroma cacao
Thecc1EG007877 2.0kb upstream 2.0kb upstream 6189 true scaffold_2: 9654808-9660996 Theobroma cacao
Thecc1EG007877 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9654808-9656807 Theobroma cacao
Thecc1EG007877 2.0kb downstream 2.0kb downstream 6189 true scaffold_2: 9656808-9662996 Theobroma cacao
Thecc1EG007877 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9660997-9662996 Theobroma cacao
Thecc1EG007877 5.0kb upstream 5.0kb upstream 9189 true scaffold_2: 9651808-9660996 Theobroma cacao
Thecc1EG007877 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9651808-9656807 Theobroma cacao
Thecc1EG007877 5.0kb downstream 5.0kb downstream 9189 true scaffold_2: 9656808-9665996 Theobroma cacao
Thecc1EG007877 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9660997-9665996 Theobroma cacao
Thecc1EG007877 10.0kb upstream 10.0kb upstream 14189 true scaffold_2: 9646808-9660996 Theobroma cacao
Thecc1EG007877 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9646808-9656807 Theobroma cacao
Thecc1EG007877 10.0kb downstream 10.0kb downstream 14189 true scaffold_2: 9656808-9670996 Theobroma cacao
Thecc1EG007877 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9660997-9670996 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831988 5264 Brassicales-Malvales View MSA
124337057 5266 SBM View MSA
124239989 5268 Malvidae View MSA
124073060 5270 Rosid View MSA
123737463 5271 Pentapetalae View MSA
122790798 5272 Eudicot View MSA
122045987 5273 Angiosperm View MSA
121343796 5274 Embryophyte View MSA
123424591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain