Gene : Thecc1EG008158 T. cacao v1.1
Defline:  (1 of 1) PTHR14493//PTHR14493:SF53 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2-RELATED Genomic Order:  1784
Name:  ? Thecc1EG008158 Secondary Identifier:  ? PAC:27459697
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008158 0.5kb upstream 0.5kb upstream 3755 true scaffold_2: 11505863-11509617 Theobroma cacao
Thecc1EG008158 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 11505863-11506362 Theobroma cacao
Thecc1EG008158 0.5kb downstream 0.5kb downstream 3755 true scaffold_2: 11506363-11510117 Theobroma cacao
Thecc1EG008158 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 11509618-11510117 Theobroma cacao
Thecc1EG008158 1.0kb upstream 1.0kb upstream 4255 true scaffold_2: 11505363-11509617 Theobroma cacao
Thecc1EG008158 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 11505363-11506362 Theobroma cacao
Thecc1EG008158 1.0kb downstream 1.0kb downstream 4255 true scaffold_2: 11506363-11510617 Theobroma cacao
Thecc1EG008158 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 11509618-11510617 Theobroma cacao
Thecc1EG008158 2.0kb upstream 2.0kb upstream 5255 true scaffold_2: 11504363-11509617 Theobroma cacao
Thecc1EG008158 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 11504363-11506362 Theobroma cacao
Thecc1EG008158 2.0kb downstream 2.0kb downstream 5255 true scaffold_2: 11506363-11511617 Theobroma cacao
Thecc1EG008158 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 11509618-11511617 Theobroma cacao
Thecc1EG008158 5.0kb upstream 5.0kb upstream 8255 true scaffold_2: 11501363-11509617 Theobroma cacao
Thecc1EG008158 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 11501363-11506362 Theobroma cacao
Thecc1EG008158 5.0kb downstream 5.0kb downstream 8255 true scaffold_2: 11506363-11514617 Theobroma cacao
Thecc1EG008158 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 11509618-11514617 Theobroma cacao
Thecc1EG008158 10.0kb upstream 10.0kb upstream 13255 true scaffold_2: 11496363-11509617 Theobroma cacao
Thecc1EG008158 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 11496363-11506362 Theobroma cacao
Thecc1EG008158 10.0kb downstream 10.0kb downstream 13255 true scaffold_2: 11506363-11519617 Theobroma cacao
Thecc1EG008158 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 11509618-11519617 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837623 5264 Brassicales-Malvales View MSA
124344221 5266 SBM View MSA
124254194 5268 Malvidae View MSA
124066464 5270 Rosid View MSA
123752127 5271 Pentapetalae View MSA
122796629 5272 Eudicot View MSA
122048745 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain