Gene : Thecc1EG008817 T. cacao v1.1
Defline:  (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease Genomic Order:  2041
Name:  ? Thecc1EG008817 Secondary Identifier:  ? PAC:27463533
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG008817 0.5kb upstream 0.5kb upstream 3900 true scaffold_2: 17305594-17309493 Theobroma cacao
Thecc1EG008817 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 17305594-17306093 Theobroma cacao
Thecc1EG008817 0.5kb downstream 0.5kb downstream 3900 true scaffold_2: 17306094-17309993 Theobroma cacao
Thecc1EG008817 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 17309494-17309993 Theobroma cacao
Thecc1EG008817 1.0kb upstream 1.0kb upstream 4400 true scaffold_2: 17305094-17309493 Theobroma cacao
Thecc1EG008817 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 17305094-17306093 Theobroma cacao
Thecc1EG008817 1.0kb downstream 1.0kb downstream 4400 true scaffold_2: 17306094-17310493 Theobroma cacao
Thecc1EG008817 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 17309494-17310493 Theobroma cacao
Thecc1EG008817 2.0kb upstream 2.0kb upstream 5400 true scaffold_2: 17304094-17309493 Theobroma cacao
Thecc1EG008817 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 17304094-17306093 Theobroma cacao
Thecc1EG008817 2.0kb downstream 2.0kb downstream 5400 true scaffold_2: 17306094-17311493 Theobroma cacao
Thecc1EG008817 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 17309494-17311493 Theobroma cacao
Thecc1EG008817 5.0kb upstream 5.0kb upstream 8400 true scaffold_2: 17301094-17309493 Theobroma cacao
Thecc1EG008817 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 17301094-17306093 Theobroma cacao
Thecc1EG008817 5.0kb downstream 5.0kb downstream 8400 true scaffold_2: 17306094-17314493 Theobroma cacao
Thecc1EG008817 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 17309494-17314493 Theobroma cacao
Thecc1EG008817 10.0kb upstream 10.0kb upstream 13400 true scaffold_2: 17296094-17309493 Theobroma cacao
Thecc1EG008817 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 17296094-17306093 Theobroma cacao
Thecc1EG008817 10.0kb downstream 10.0kb downstream 13400 true scaffold_2: 17306094-17319493 Theobroma cacao
Thecc1EG008817 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 17309494-17319493 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831243 5264 Brassicales-Malvales View MSA
124343538 5266 SBM View MSA
124237124 5268 Malvidae View MSA
124069027 5270 Rosid View MSA
123737272 5271 Pentapetalae View MSA
122785941 5272 Eudicot View MSA
122044879 5273 Angiosperm View MSA
121344923 5274 Embryophyte View MSA
123425704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain