Gene : Thecc1EG009571 T. cacao v1.1
Defline:  (1 of 1) PF13960//PF13963 - Domain of unknown function (DUF4218) (DUF4218) // Transposase-associated domain (Transpos_assoc) Genomic Order:  2222
Name:  ? Thecc1EG009571 Secondary Identifier:  ? PAC:27462387
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG009571 0.5kb upstream 0.5kb upstream 3746 true scaffold_2: 25494472-25498217 Theobroma cacao
Thecc1EG009571 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 25497718-25498217 Theobroma cacao
Thecc1EG009571 0.5kb downstream 0.5kb downstream 3746 true scaffold_2: 25493972-25497717 Theobroma cacao
Thecc1EG009571 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 25493972-25494471 Theobroma cacao
Thecc1EG009571 1.0kb upstream 1.0kb upstream 4246 true scaffold_2: 25494472-25498717 Theobroma cacao
Thecc1EG009571 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 25497718-25498717 Theobroma cacao
Thecc1EG009571 1.0kb downstream 1.0kb downstream 4246 true scaffold_2: 25493472-25497717 Theobroma cacao
Thecc1EG009571 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 25493472-25494471 Theobroma cacao
Thecc1EG009571 2.0kb upstream 2.0kb upstream 5246 true scaffold_2: 25494472-25499717 Theobroma cacao
Thecc1EG009571 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 25497718-25499717 Theobroma cacao
Thecc1EG009571 2.0kb downstream 2.0kb downstream 5246 true scaffold_2: 25492472-25497717 Theobroma cacao
Thecc1EG009571 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 25492472-25494471 Theobroma cacao
Thecc1EG009571 5.0kb upstream 5.0kb upstream 8246 true scaffold_2: 25494472-25502717 Theobroma cacao
Thecc1EG009571 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 25497718-25502717 Theobroma cacao
Thecc1EG009571 5.0kb downstream 5.0kb downstream 8246 true scaffold_2: 25489472-25497717 Theobroma cacao
Thecc1EG009571 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 25489472-25494471 Theobroma cacao
Thecc1EG009571 10.0kb upstream 10.0kb upstream 13246 true scaffold_2: 25494472-25507717 Theobroma cacao
Thecc1EG009571 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 25497718-25507717 Theobroma cacao
Thecc1EG009571 10.0kb downstream 10.0kb downstream 13246 true scaffold_2: 25484472-25497717 Theobroma cacao
Thecc1EG009571 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 25484472-25494471 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123817371 5264 Brassicales-Malvales Singleton cluster - no MSA
124313726 5266 SBM Singleton cluster - no MSA
124162787 5268 Malvidae Singleton cluster - no MSA
124039042 5270 Rosid View MSA
123751643 5271 Pentapetalae View MSA
122774113 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain