Gene : Thecc1EG010314 T. cacao v1.1
Defline:  (1 of 1) PTHR30544//PTHR30544:SF3 - 23S RRNA METHYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  2483
Name:  ? Thecc1EG010314 Secondary Identifier:  ? PAC:27461979
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010314 0.5kb upstream 0.5kb upstream 4955 true scaffold_2: 32458830-32463784 Theobroma cacao
Thecc1EG010314 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 32463285-32463784 Theobroma cacao
Thecc1EG010314 0.5kb downstream 0.5kb downstream 4955 true scaffold_2: 32458330-32463284 Theobroma cacao
Thecc1EG010314 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 32458330-32458829 Theobroma cacao
Thecc1EG010314 1.0kb upstream 1.0kb upstream 5455 true scaffold_2: 32458830-32464284 Theobroma cacao
Thecc1EG010314 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 32463285-32464284 Theobroma cacao
Thecc1EG010314 1.0kb downstream 1.0kb downstream 5455 true scaffold_2: 32457830-32463284 Theobroma cacao
Thecc1EG010314 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 32457830-32458829 Theobroma cacao
Thecc1EG010314 2.0kb upstream 2.0kb upstream 6455 true scaffold_2: 32458830-32465284 Theobroma cacao
Thecc1EG010314 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 32463285-32465284 Theobroma cacao
Thecc1EG010314 2.0kb downstream 2.0kb downstream 6455 true scaffold_2: 32456830-32463284 Theobroma cacao
Thecc1EG010314 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 32456830-32458829 Theobroma cacao
Thecc1EG010314 5.0kb upstream 5.0kb upstream 9455 true scaffold_2: 32458830-32468284 Theobroma cacao
Thecc1EG010314 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 32463285-32468284 Theobroma cacao
Thecc1EG010314 5.0kb downstream 5.0kb downstream 9455 true scaffold_2: 32453830-32463284 Theobroma cacao
Thecc1EG010314 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 32453830-32458829 Theobroma cacao
Thecc1EG010314 10.0kb upstream 10.0kb upstream 14455 true scaffold_2: 32458830-32473284 Theobroma cacao
Thecc1EG010314 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 32463285-32473284 Theobroma cacao
Thecc1EG010314 10.0kb downstream 10.0kb downstream 14455 true scaffold_2: 32448830-32463284 Theobroma cacao
Thecc1EG010314 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 32448830-32458829 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834635 5264 Brassicales-Malvales View MSA
124340315 5266 SBM View MSA
124241965 5268 Malvidae View MSA
124065414 5270 Rosid View MSA
123740690 5271 Pentapetalae View MSA
122787851 5272 Eudicot View MSA
122043195 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121346291 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain