Gene : Thecc1EG010178 T. cacao v1.1
Defline:  (1 of 3) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  2406
Name:  ? Thecc1EG010178 Secondary Identifier:  ? PAC:27462328
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010178 0.5kb upstream 0.5kb upstream 1905 true scaffold_2: 31351157-31353061 Theobroma cacao
Thecc1EG010178 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 31352562-31353061 Theobroma cacao
Thecc1EG010178 0.5kb downstream 0.5kb downstream 1905 true scaffold_2: 31350657-31352561 Theobroma cacao
Thecc1EG010178 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 31350657-31351156 Theobroma cacao
Thecc1EG010178 1.0kb upstream 1.0kb upstream 2405 true scaffold_2: 31351157-31353561 Theobroma cacao
Thecc1EG010178 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 31352562-31353561 Theobroma cacao
Thecc1EG010178 1.0kb downstream 1.0kb downstream 2405 true scaffold_2: 31350157-31352561 Theobroma cacao
Thecc1EG010178 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 31350157-31351156 Theobroma cacao
Thecc1EG010178 2.0kb upstream 2.0kb upstream 3405 true scaffold_2: 31351157-31354561 Theobroma cacao
Thecc1EG010178 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 31352562-31354561 Theobroma cacao
Thecc1EG010178 2.0kb downstream 2.0kb downstream 3405 true scaffold_2: 31349157-31352561 Theobroma cacao
Thecc1EG010178 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 31349157-31351156 Theobroma cacao
Thecc1EG010178 5.0kb upstream 5.0kb upstream 6405 true scaffold_2: 31351157-31357561 Theobroma cacao
Thecc1EG010178 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 31352562-31357561 Theobroma cacao
Thecc1EG010178 5.0kb downstream 5.0kb downstream 6405 true scaffold_2: 31346157-31352561 Theobroma cacao
Thecc1EG010178 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 31346157-31351156 Theobroma cacao
Thecc1EG010178 10.0kb upstream 10.0kb upstream 11405 true scaffold_2: 31351157-31362561 Theobroma cacao
Thecc1EG010178 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 31352562-31362561 Theobroma cacao
Thecc1EG010178 10.0kb downstream 10.0kb downstream 11405 true scaffold_2: 31341157-31352561 Theobroma cacao
Thecc1EG010178 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 31341157-31351156 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839125 5264 Brassicales-Malvales View MSA
124339069 5266 SBM View MSA
124243658 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain