Gene : Thecc1EG010158 T. cacao v1.1
Defline:  (1 of 1) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 Genomic Order:  2401
Name:  ? Thecc1EG010158 Secondary Identifier:  ? PAC:27463538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010158 0.5kb upstream 0.5kb upstream 2115 true scaffold_2: 31169514-31171628 Theobroma cacao
Thecc1EG010158 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 31169514-31170013 Theobroma cacao
Thecc1EG010158 0.5kb downstream 0.5kb downstream 2115 true scaffold_2: 31170014-31172128 Theobroma cacao
Thecc1EG010158 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 31171629-31172128 Theobroma cacao
Thecc1EG010158 1.0kb upstream 1.0kb upstream 2615 true scaffold_2: 31169014-31171628 Theobroma cacao
Thecc1EG010158 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 31169014-31170013 Theobroma cacao
Thecc1EG010158 1.0kb downstream 1.0kb downstream 2615 true scaffold_2: 31170014-31172628 Theobroma cacao
Thecc1EG010158 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 31171629-31172628 Theobroma cacao
Thecc1EG010158 2.0kb upstream 2.0kb upstream 3615 true scaffold_2: 31168014-31171628 Theobroma cacao
Thecc1EG010158 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 31168014-31170013 Theobroma cacao
Thecc1EG010158 2.0kb downstream 2.0kb downstream 3615 true scaffold_2: 31170014-31173628 Theobroma cacao
Thecc1EG010158 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 31171629-31173628 Theobroma cacao
Thecc1EG010158 5.0kb upstream 5.0kb upstream 6615 true scaffold_2: 31165014-31171628 Theobroma cacao
Thecc1EG010158 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 31165014-31170013 Theobroma cacao
Thecc1EG010158 5.0kb downstream 5.0kb downstream 6615 true scaffold_2: 31170014-31176628 Theobroma cacao
Thecc1EG010158 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 31171629-31176628 Theobroma cacao
Thecc1EG010158 10.0kb upstream 10.0kb upstream 11615 true scaffold_2: 31160014-31171628 Theobroma cacao
Thecc1EG010158 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 31160014-31170013 Theobroma cacao
Thecc1EG010158 10.0kb downstream 10.0kb downstream 11615 true scaffold_2: 31170014-31181628 Theobroma cacao
Thecc1EG010158 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 31171629-31181628 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041440 5273 Angiosperm View MSA
123835470 5264 Brassicales-Malvales View MSA
124350845 5266 SBM View MSA
124249735 5268 Malvidae View MSA
124061806 5270 Rosid View MSA
123745217 5271 Pentapetalae View MSA
122786222 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain