Gene : Thecc1EG010495 T. cacao v1.1
Defline:  (1 of 3) PTHR11206//PTHR11206:SF79 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  2589
Name:  ? Thecc1EG010495 Secondary Identifier:  ? PAC:27459762
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010495 0.5kb upstream 0.5kb upstream 6218 true scaffold_2: 33840810-33847027 Theobroma cacao
Thecc1EG010495 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 33840810-33841309 Theobroma cacao
Thecc1EG010495 0.5kb downstream 0.5kb downstream 6218 true scaffold_2: 33841310-33847527 Theobroma cacao
Thecc1EG010495 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 33847028-33847527 Theobroma cacao
Thecc1EG010495 1.0kb upstream 1.0kb upstream 6718 true scaffold_2: 33840310-33847027 Theobroma cacao
Thecc1EG010495 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 33840310-33841309 Theobroma cacao
Thecc1EG010495 1.0kb downstream 1.0kb downstream 6718 true scaffold_2: 33841310-33848027 Theobroma cacao
Thecc1EG010495 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 33847028-33848027 Theobroma cacao
Thecc1EG010495 2.0kb upstream 2.0kb upstream 7718 true scaffold_2: 33839310-33847027 Theobroma cacao
Thecc1EG010495 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 33839310-33841309 Theobroma cacao
Thecc1EG010495 2.0kb downstream 2.0kb downstream 7718 true scaffold_2: 33841310-33849027 Theobroma cacao
Thecc1EG010495 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 33847028-33849027 Theobroma cacao
Thecc1EG010495 5.0kb upstream 5.0kb upstream 10718 true scaffold_2: 33836310-33847027 Theobroma cacao
Thecc1EG010495 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 33836310-33841309 Theobroma cacao
Thecc1EG010495 5.0kb downstream 5.0kb downstream 10718 true scaffold_2: 33841310-33852027 Theobroma cacao
Thecc1EG010495 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 33847028-33852027 Theobroma cacao
Thecc1EG010495 10.0kb upstream 10.0kb upstream 15718 true scaffold_2: 33831310-33847027 Theobroma cacao
Thecc1EG010495 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 33831310-33841309 Theobroma cacao
Thecc1EG010495 10.0kb downstream 10.0kb downstream 15718 true scaffold_2: 33841310-33857027 Theobroma cacao
Thecc1EG010495 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 33847028-33857027 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836545 5264 Brassicales-Malvales View MSA
124345472 5266 SBM View MSA
124244328 5268 Malvidae View MSA
124068110 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain