Gene : Thecc1EG010769 T. cacao v1.1

Defline:  (1 of 1) PTHR31471//PTHR31471:SF15 - FAMILY NOT NAMED // F12A21.28 Genomic Order:  2746
Name:  ? Thecc1EG010769 Secondary Identifier:  ? PAC:27464900

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010769 0.5kb upstream 0.5kb upstream 2912 true scaffold_2: 35491682-35494593 Theobroma cacao
Thecc1EG010769 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35491682-35492181 Theobroma cacao
Thecc1EG010769 0.5kb downstream 0.5kb downstream 2912 true scaffold_2: 35492182-35495093 Theobroma cacao
Thecc1EG010769 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35494594-35495093 Theobroma cacao
Thecc1EG010769 1.0kb upstream 1.0kb upstream 3412 true scaffold_2: 35491182-35494593 Theobroma cacao
Thecc1EG010769 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35491182-35492181 Theobroma cacao
Thecc1EG010769 1.0kb downstream 1.0kb downstream 3412 true scaffold_2: 35492182-35495593 Theobroma cacao
Thecc1EG010769 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35494594-35495593 Theobroma cacao
Thecc1EG010769 2.0kb upstream 2.0kb upstream 4412 true scaffold_2: 35490182-35494593 Theobroma cacao
Thecc1EG010769 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35490182-35492181 Theobroma cacao
Thecc1EG010769 2.0kb downstream 2.0kb downstream 4412 true scaffold_2: 35492182-35496593 Theobroma cacao
Thecc1EG010769 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35494594-35496593 Theobroma cacao
Thecc1EG010769 5.0kb upstream 5.0kb upstream 7412 true scaffold_2: 35487182-35494593 Theobroma cacao
Thecc1EG010769 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35487182-35492181 Theobroma cacao
Thecc1EG010769 5.0kb downstream 5.0kb downstream 7412 true scaffold_2: 35492182-35499593 Theobroma cacao
Thecc1EG010769 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35494594-35499593 Theobroma cacao
Thecc1EG010769 10.0kb upstream 10.0kb upstream 12412 true scaffold_2: 35482182-35494593 Theobroma cacao
Thecc1EG010769 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35482182-35492181 Theobroma cacao
Thecc1EG010769 10.0kb downstream 10.0kb downstream 12412 true scaffold_2: 35492182-35504593 Theobroma cacao
Thecc1EG010769 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35494594-35504593 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835340 5264 Brassicales-Malvales View MSA
124322030 5266 SBM View MSA
124236831 5268 Malvidae View MSA
124068162 5270 Rosid View MSA
123748967 5271 Pentapetalae View MSA
122788791 5272 Eudicot View MSA
122047060 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain