Gene : Thecc1EG010758 T. cacao v1.1
Defline:  (1 of 30) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  2736
Name:  ? Thecc1EG010758 Secondary Identifier:  ? PAC:27463917
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010758 0.5kb upstream 0.5kb upstream 3643 true scaffold_2: 35427314-35430956 Theobroma cacao
Thecc1EG010758 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35427314-35427813 Theobroma cacao
Thecc1EG010758 0.5kb downstream 0.5kb downstream 3643 true scaffold_2: 35427814-35431456 Theobroma cacao
Thecc1EG010758 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35430957-35431456 Theobroma cacao
Thecc1EG010758 1.0kb upstream 1.0kb upstream 4143 true scaffold_2: 35426814-35430956 Theobroma cacao
Thecc1EG010758 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35426814-35427813 Theobroma cacao
Thecc1EG010758 1.0kb downstream 1.0kb downstream 4143 true scaffold_2: 35427814-35431956 Theobroma cacao
Thecc1EG010758 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35430957-35431956 Theobroma cacao
Thecc1EG010758 2.0kb upstream 2.0kb upstream 5143 true scaffold_2: 35425814-35430956 Theobroma cacao
Thecc1EG010758 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35425814-35427813 Theobroma cacao
Thecc1EG010758 2.0kb downstream 2.0kb downstream 5143 true scaffold_2: 35427814-35432956 Theobroma cacao
Thecc1EG010758 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35430957-35432956 Theobroma cacao
Thecc1EG010758 5.0kb upstream 5.0kb upstream 8143 true scaffold_2: 35422814-35430956 Theobroma cacao
Thecc1EG010758 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35422814-35427813 Theobroma cacao
Thecc1EG010758 5.0kb downstream 5.0kb downstream 8143 true scaffold_2: 35427814-35435956 Theobroma cacao
Thecc1EG010758 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35430957-35435956 Theobroma cacao
Thecc1EG010758 10.0kb upstream 10.0kb upstream 13143 true scaffold_2: 35417814-35430956 Theobroma cacao
Thecc1EG010758 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35417814-35427813 Theobroma cacao
Thecc1EG010758 10.0kb downstream 10.0kb downstream 13143 true scaffold_2: 35427814-35440956 Theobroma cacao
Thecc1EG010758 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35430957-35440956 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831836 5264 Brassicales-Malvales View MSA
124345972 5266 SBM View MSA
124242444 5268 Malvidae View MSA
124060677 5270 Rosid View MSA
123746655 5271 Pentapetalae View MSA
122793179 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain