Gene : Thecc1EG010657 T. cacao v1.1

Defline:  (1 of 1) PTHR10314//PTHR10314:SF70 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2670
Name:  ? Thecc1EG010657 Secondary Identifier:  ? PAC:27461640

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010657 0.5kb upstream 0.5kb upstream 6670 true scaffold_2: 34760000-34766669 Theobroma cacao
Thecc1EG010657 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 34766170-34766669 Theobroma cacao
Thecc1EG010657 0.5kb downstream 0.5kb downstream 6670 true scaffold_2: 34759500-34766169 Theobroma cacao
Thecc1EG010657 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 34759500-34759999 Theobroma cacao
Thecc1EG010657 1.0kb upstream 1.0kb upstream 7170 true scaffold_2: 34760000-34767169 Theobroma cacao
Thecc1EG010657 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 34766170-34767169 Theobroma cacao
Thecc1EG010657 1.0kb downstream 1.0kb downstream 7170 true scaffold_2: 34759000-34766169 Theobroma cacao
Thecc1EG010657 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 34759000-34759999 Theobroma cacao
Thecc1EG010657 2.0kb upstream 2.0kb upstream 8170 true scaffold_2: 34760000-34768169 Theobroma cacao
Thecc1EG010657 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 34766170-34768169 Theobroma cacao
Thecc1EG010657 2.0kb downstream 2.0kb downstream 8170 true scaffold_2: 34758000-34766169 Theobroma cacao
Thecc1EG010657 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 34758000-34759999 Theobroma cacao
Thecc1EG010657 5.0kb upstream 5.0kb upstream 11170 true scaffold_2: 34760000-34771169 Theobroma cacao
Thecc1EG010657 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 34766170-34771169 Theobroma cacao
Thecc1EG010657 5.0kb downstream 5.0kb downstream 11170 true scaffold_2: 34755000-34766169 Theobroma cacao
Thecc1EG010657 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 34755000-34759999 Theobroma cacao
Thecc1EG010657 10.0kb upstream 10.0kb upstream 16170 true scaffold_2: 34760000-34776169 Theobroma cacao
Thecc1EG010657 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 34766170-34776169 Theobroma cacao
Thecc1EG010657 10.0kb downstream 10.0kb downstream 16170 true scaffold_2: 34750000-34766169 Theobroma cacao
Thecc1EG010657 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 34750000-34759999 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830632 5264 Brassicales-Malvales View MSA
124342924 5266 SBM View MSA
124238214 5268 Malvidae View MSA
124062941 5270 Rosid View MSA
123740712 5271 Pentapetalae View MSA
122793656 5272 Eudicot View MSA
122051131 5273 Angiosperm View MSA
121346707 5274 Embryophyte View MSA
123428019 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain