Gene : Thecc1EG010806 T. cacao v1.1

Defline:  (1 of 12) PTHR27004//PTHR27004:SF21 - FAMILY NOT NAMED // DISEASE RESISTANCE-LIKE PROTEIN/LRR DOMAIN-CONTAINING PROTEIN Genomic Order:  2773
Name:  ? Thecc1EG010806 Secondary Identifier:  ? PAC:27460975

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG010806 0.5kb upstream 0.5kb upstream 9504 true scaffold_2: 35687862-35697365 Theobroma cacao
Thecc1EG010806 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 35696866-35697365 Theobroma cacao
Thecc1EG010806 0.5kb downstream 0.5kb downstream 9504 true scaffold_2: 35687362-35696865 Theobroma cacao
Thecc1EG010806 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 35687362-35687861 Theobroma cacao
Thecc1EG010806 1.0kb upstream 1.0kb upstream 10004 true scaffold_2: 35687862-35697865 Theobroma cacao
Thecc1EG010806 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 35696866-35697865 Theobroma cacao
Thecc1EG010806 1.0kb downstream 1.0kb downstream 10004 true scaffold_2: 35686862-35696865 Theobroma cacao
Thecc1EG010806 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 35686862-35687861 Theobroma cacao
Thecc1EG010806 2.0kb upstream 2.0kb upstream 11004 true scaffold_2: 35687862-35698865 Theobroma cacao
Thecc1EG010806 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 35696866-35698865 Theobroma cacao
Thecc1EG010806 2.0kb downstream 2.0kb downstream 11004 true scaffold_2: 35685862-35696865 Theobroma cacao
Thecc1EG010806 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 35685862-35687861 Theobroma cacao
Thecc1EG010806 5.0kb upstream 5.0kb upstream 14004 true scaffold_2: 35687862-35701865 Theobroma cacao
Thecc1EG010806 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 35696866-35701865 Theobroma cacao
Thecc1EG010806 5.0kb downstream 5.0kb downstream 14004 true scaffold_2: 35682862-35696865 Theobroma cacao
Thecc1EG010806 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 35682862-35687861 Theobroma cacao
Thecc1EG010806 10.0kb upstream 10.0kb upstream 19004 true scaffold_2: 35687862-35706865 Theobroma cacao
Thecc1EG010806 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 35696866-35706865 Theobroma cacao
Thecc1EG010806 10.0kb downstream 10.0kb downstream 19004 true scaffold_2: 35677862-35696865 Theobroma cacao
Thecc1EG010806 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 35677862-35687861 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826371 5264 Brassicales-Malvales View MSA
124321011 5266 SBM View MSA
124249182 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain