Gene : Thecc1EG011122 T. cacao v1.1
Defline:  (1 of 5) PTHR31388//PTHR31388:SF37 - FAMILY NOT NAMED // PEROXIDASE 4-RELATED Genomic Order:  2971
Name:  ? Thecc1EG011122 Secondary Identifier:  ? PAC:27464206
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011122 0.5kb upstream 0.5kb upstream 10045 true scaffold_2: 38104677-38114721 Theobroma cacao
Thecc1EG011122 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38114222-38114721 Theobroma cacao
Thecc1EG011122 0.5kb downstream 0.5kb downstream 10045 true scaffold_2: 38104177-38114221 Theobroma cacao
Thecc1EG011122 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38104177-38104676 Theobroma cacao
Thecc1EG011122 1.0kb upstream 1.0kb upstream 10545 true scaffold_2: 38104677-38115221 Theobroma cacao
Thecc1EG011122 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38114222-38115221 Theobroma cacao
Thecc1EG011122 1.0kb downstream 1.0kb downstream 10545 true scaffold_2: 38103677-38114221 Theobroma cacao
Thecc1EG011122 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38103677-38104676 Theobroma cacao
Thecc1EG011122 2.0kb upstream 2.0kb upstream 11545 true scaffold_2: 38104677-38116221 Theobroma cacao
Thecc1EG011122 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38114222-38116221 Theobroma cacao
Thecc1EG011122 2.0kb downstream 2.0kb downstream 11545 true scaffold_2: 38102677-38114221 Theobroma cacao
Thecc1EG011122 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38102677-38104676 Theobroma cacao
Thecc1EG011122 5.0kb upstream 5.0kb upstream 14545 true scaffold_2: 38104677-38119221 Theobroma cacao
Thecc1EG011122 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38114222-38119221 Theobroma cacao
Thecc1EG011122 5.0kb downstream 5.0kb downstream 14545 true scaffold_2: 38099677-38114221 Theobroma cacao
Thecc1EG011122 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38099677-38104676 Theobroma cacao
Thecc1EG011122 10.0kb upstream 10.0kb upstream 19545 true scaffold_2: 38104677-38124221 Theobroma cacao
Thecc1EG011122 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38114222-38124221 Theobroma cacao
Thecc1EG011122 10.0kb downstream 10.0kb downstream 19545 true scaffold_2: 38094677-38114221 Theobroma cacao
Thecc1EG011122 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38094677-38104676 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836938 5264 Brassicales-Malvales View MSA
124322227 5266 SBM View MSA
124249111 5268 Malvidae View MSA
124068770 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain