Gene : Thecc1EG011232 T. cacao v1.1
Defline:  (1 of 5) PTHR10161 - TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5 Genomic Order:  3044
Name:  ? Thecc1EG011232 Secondary Identifier:  ? PAC:27461349
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5083 Theobroma cacao pathologic  
Tcacao PWY-6348 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011232 0.5kb upstream 0.5kb upstream 3542 true scaffold_2: 38861923-38865464 Theobroma cacao
Thecc1EG011232 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 38861923-38862422 Theobroma cacao
Thecc1EG011232 0.5kb downstream 0.5kb downstream 3542 true scaffold_2: 38862423-38865964 Theobroma cacao
Thecc1EG011232 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 38865465-38865964 Theobroma cacao
Thecc1EG011232 1.0kb upstream 1.0kb upstream 4042 true scaffold_2: 38861423-38865464 Theobroma cacao
Thecc1EG011232 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 38861423-38862422 Theobroma cacao
Thecc1EG011232 1.0kb downstream 1.0kb downstream 4042 true scaffold_2: 38862423-38866464 Theobroma cacao
Thecc1EG011232 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 38865465-38866464 Theobroma cacao
Thecc1EG011232 2.0kb upstream 2.0kb upstream 5042 true scaffold_2: 38860423-38865464 Theobroma cacao
Thecc1EG011232 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 38860423-38862422 Theobroma cacao
Thecc1EG011232 2.0kb downstream 2.0kb downstream 5042 true scaffold_2: 38862423-38867464 Theobroma cacao
Thecc1EG011232 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 38865465-38867464 Theobroma cacao
Thecc1EG011232 5.0kb upstream 5.0kb upstream 8042 true scaffold_2: 38857423-38865464 Theobroma cacao
Thecc1EG011232 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 38857423-38862422 Theobroma cacao
Thecc1EG011232 5.0kb downstream 5.0kb downstream 8042 true scaffold_2: 38862423-38870464 Theobroma cacao
Thecc1EG011232 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 38865465-38870464 Theobroma cacao
Thecc1EG011232 10.0kb upstream 10.0kb upstream 13042 true scaffold_2: 38852423-38865464 Theobroma cacao
Thecc1EG011232 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 38852423-38862422 Theobroma cacao
Thecc1EG011232 10.0kb downstream 10.0kb downstream 13042 true scaffold_2: 38862423-38875464 Theobroma cacao
Thecc1EG011232 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 38865465-38875464 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842188 5264 Brassicales-Malvales View MSA
124323308 5266 SBM View MSA
124248897 5268 Malvidae View MSA
124061132 5270 Rosid View MSA
123743122 5271 Pentapetalae View MSA
122795933 5272 Eudicot View MSA
122045102 5273 Angiosperm View MSA
121351076 5274 Embryophyte View MSA
123427142 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain