Gene : Thecc1EG011673 T. cacao v1.1

Defline:  (1 of 2) KOG3292 - Predicted membrane protein Genomic Order:  3415
Name:  ? Thecc1EG011673 Secondary Identifier:  ? PAC:27462867

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011673 0.5kb upstream 0.5kb upstream 2703 true scaffold_2: 41240531-41243233 Theobroma cacao
Thecc1EG011673 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41242734-41243233 Theobroma cacao
Thecc1EG011673 0.5kb downstream 0.5kb downstream 2703 true scaffold_2: 41240031-41242733 Theobroma cacao
Thecc1EG011673 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41240031-41240530 Theobroma cacao
Thecc1EG011673 1.0kb upstream 1.0kb upstream 3203 true scaffold_2: 41240531-41243733 Theobroma cacao
Thecc1EG011673 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41242734-41243733 Theobroma cacao
Thecc1EG011673 1.0kb downstream 1.0kb downstream 3203 true scaffold_2: 41239531-41242733 Theobroma cacao
Thecc1EG011673 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41239531-41240530 Theobroma cacao
Thecc1EG011673 2.0kb upstream 2.0kb upstream 4203 true scaffold_2: 41240531-41244733 Theobroma cacao
Thecc1EG011673 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41242734-41244733 Theobroma cacao
Thecc1EG011673 2.0kb downstream 2.0kb downstream 4203 true scaffold_2: 41238531-41242733 Theobroma cacao
Thecc1EG011673 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41238531-41240530 Theobroma cacao
Thecc1EG011673 5.0kb upstream 5.0kb upstream 7203 true scaffold_2: 41240531-41247733 Theobroma cacao
Thecc1EG011673 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41242734-41247733 Theobroma cacao
Thecc1EG011673 5.0kb downstream 5.0kb downstream 7203 true scaffold_2: 41235531-41242733 Theobroma cacao
Thecc1EG011673 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41235531-41240530 Theobroma cacao
Thecc1EG011673 10.0kb upstream 10.0kb upstream 12203 true scaffold_2: 41240531-41252733 Theobroma cacao
Thecc1EG011673 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41242734-41252733 Theobroma cacao
Thecc1EG011673 10.0kb downstream 10.0kb downstream 12203 true scaffold_2: 41230531-41242733 Theobroma cacao
Thecc1EG011673 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41230531-41240530 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
123827037 5264 Brassicales-Malvales View MSA
124321279 5266 SBM View MSA
124248288 5268 Malvidae View MSA
124067528 5270 Rosid View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain