Gene : Thecc1EG011767 T. cacao v1.1

Defline:  (1 of 58) PTHR22763 - RING ZINC FINGER PROTEIN Genomic Order:  3495
Name:  ? Thecc1EG011767 Secondary Identifier:  ? PAC:27462919

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011767 0.5kb upstream 0.5kb upstream 1025 true scaffold_2: 41653239-41654263 Theobroma cacao
Thecc1EG011767 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 41653764-41654263 Theobroma cacao
Thecc1EG011767 0.5kb downstream 0.5kb downstream 1025 true scaffold_2: 41652739-41653763 Theobroma cacao
Thecc1EG011767 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 41652739-41653238 Theobroma cacao
Thecc1EG011767 1.0kb upstream 1.0kb upstream 1525 true scaffold_2: 41653239-41654763 Theobroma cacao
Thecc1EG011767 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 41653764-41654763 Theobroma cacao
Thecc1EG011767 1.0kb downstream 1.0kb downstream 1525 true scaffold_2: 41652239-41653763 Theobroma cacao
Thecc1EG011767 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 41652239-41653238 Theobroma cacao
Thecc1EG011767 2.0kb upstream 2.0kb upstream 2525 true scaffold_2: 41653239-41655763 Theobroma cacao
Thecc1EG011767 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 41653764-41655763 Theobroma cacao
Thecc1EG011767 2.0kb downstream 2.0kb downstream 2525 true scaffold_2: 41651239-41653763 Theobroma cacao
Thecc1EG011767 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 41651239-41653238 Theobroma cacao
Thecc1EG011767 5.0kb upstream 5.0kb upstream 5525 true scaffold_2: 41653239-41658763 Theobroma cacao
Thecc1EG011767 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 41653764-41658763 Theobroma cacao
Thecc1EG011767 5.0kb downstream 5.0kb downstream 5525 true scaffold_2: 41648239-41653763 Theobroma cacao
Thecc1EG011767 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 41648239-41653238 Theobroma cacao
Thecc1EG011767 10.0kb upstream 10.0kb upstream 10525 true scaffold_2: 41653239-41663763 Theobroma cacao
Thecc1EG011767 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 41653764-41663763 Theobroma cacao
Thecc1EG011767 10.0kb downstream 10.0kb downstream 10525 true scaffold_2: 41643239-41653763 Theobroma cacao
Thecc1EG011767 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 41643239-41653238 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839259 5264 Brassicales-Malvales View MSA
124349992 5266 SBM View MSA
124250573 5268 Malvidae View MSA
124074559 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain