Gene : Thecc1EG046713 T. cacao v1.1
Defline:  (1 of 1) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  447
Name:  ? Thecc1EG046713 Secondary Identifier:  ? PAC:27461048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046713 0.5kb upstream 0.5kb upstream 3378 true scaffold_2: 2399142-2402519 Theobroma cacao
Thecc1EG046713 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2402020-2402519 Theobroma cacao
Thecc1EG046713 0.5kb downstream 0.5kb downstream 3378 true scaffold_2: 2398642-2402019 Theobroma cacao
Thecc1EG046713 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2398642-2399141 Theobroma cacao
Thecc1EG046713 1.0kb upstream 1.0kb upstream 3878 true scaffold_2: 2399142-2403019 Theobroma cacao
Thecc1EG046713 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2402020-2403019 Theobroma cacao
Thecc1EG046713 1.0kb downstream 1.0kb downstream 3878 true scaffold_2: 2398142-2402019 Theobroma cacao
Thecc1EG046713 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2398142-2399141 Theobroma cacao
Thecc1EG046713 2.0kb upstream 2.0kb upstream 4878 true scaffold_2: 2399142-2404019 Theobroma cacao
Thecc1EG046713 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2402020-2404019 Theobroma cacao
Thecc1EG046713 2.0kb downstream 2.0kb downstream 4878 true scaffold_2: 2397142-2402019 Theobroma cacao
Thecc1EG046713 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2397142-2399141 Theobroma cacao
Thecc1EG046713 5.0kb upstream 5.0kb upstream 7878 true scaffold_2: 2399142-2407019 Theobroma cacao
Thecc1EG046713 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2402020-2407019 Theobroma cacao
Thecc1EG046713 5.0kb downstream 5.0kb downstream 7878 true scaffold_2: 2394142-2402019 Theobroma cacao
Thecc1EG046713 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2394142-2399141 Theobroma cacao
Thecc1EG046713 10.0kb upstream 10.0kb upstream 12878 true scaffold_2: 2399142-2412019 Theobroma cacao
Thecc1EG046713 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2402020-2412019 Theobroma cacao
Thecc1EG046713 10.0kb downstream 10.0kb downstream 12878 true scaffold_2: 2389142-2402019 Theobroma cacao
Thecc1EG046713 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2389142-2399141 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
123831346 5264 Brassicales-Malvales View MSA
124342437 5266 SBM View MSA
124251635 5268 Malvidae View MSA
124066383 5270 Rosid View MSA
123740270 5271 Pentapetalae View MSA
122790310 5272 Eudicot View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain