Gene : Thecc1EG011869 T. cacao v1.1

Defline:  (1 of 1) PTHR31079//PTHR31079:SF9 - FAMILY NOT NAMED // NAC DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  3590
Name:  ? Thecc1EG011869 Secondary Identifier:  ? PAC:27462472

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011869 0.5kb upstream 0.5kb upstream 5313 true scaffold_2: 42107665-42112977 Theobroma cacao
Thecc1EG011869 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 42112478-42112977 Theobroma cacao
Thecc1EG011869 0.5kb downstream 0.5kb downstream 5313 true scaffold_2: 42107165-42112477 Theobroma cacao
Thecc1EG011869 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 42107165-42107664 Theobroma cacao
Thecc1EG011869 1.0kb upstream 1.0kb upstream 5813 true scaffold_2: 42107665-42113477 Theobroma cacao
Thecc1EG011869 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 42112478-42113477 Theobroma cacao
Thecc1EG011869 1.0kb downstream 1.0kb downstream 5813 true scaffold_2: 42106665-42112477 Theobroma cacao
Thecc1EG011869 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 42106665-42107664 Theobroma cacao
Thecc1EG011869 2.0kb upstream 2.0kb upstream 6813 true scaffold_2: 42107665-42114477 Theobroma cacao
Thecc1EG011869 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 42112478-42114477 Theobroma cacao
Thecc1EG011869 2.0kb downstream 2.0kb downstream 6813 true scaffold_2: 42105665-42112477 Theobroma cacao
Thecc1EG011869 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 42105665-42107664 Theobroma cacao
Thecc1EG011869 5.0kb upstream 5.0kb upstream 9813 true scaffold_2: 42107665-42117477 Theobroma cacao
Thecc1EG011869 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 42112478-42117477 Theobroma cacao
Thecc1EG011869 5.0kb downstream 5.0kb downstream 9813 true scaffold_2: 42102665-42112477 Theobroma cacao
Thecc1EG011869 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 42102665-42107664 Theobroma cacao
Thecc1EG011869 10.0kb upstream 10.0kb upstream 14813 true scaffold_2: 42107665-42122477 Theobroma cacao
Thecc1EG011869 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 42112478-42122477 Theobroma cacao
Thecc1EG011869 10.0kb downstream 10.0kb downstream 14813 true scaffold_2: 42097665-42112477 Theobroma cacao
Thecc1EG011869 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 42097665-42107664 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840778 5264 Brassicales-Malvales View MSA
124336482 5266 SBM View MSA
124237737 5268 Malvidae View MSA
124068274 5270 Rosid View MSA
123741420 5271 Pentapetalae View MSA
122787811 5272 Eudicot View MSA
122048961 5273 Angiosperm View MSA
121311189 5274 Embryophyte View MSA
123348518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain