Gene : Thecc1EG011949 T. cacao v1.1
Defline:  (1 of 1) PTHR22814//PTHR22814:SF148 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // F1K23.4 Genomic Order:  12
Name:  ? Thecc1EG011949 Secondary Identifier:  ? PAC:27448238
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG011949 0.5kb upstream 0.5kb upstream 1894 true scaffold_3: 156405-158298 Theobroma cacao
Thecc1EG011949 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 157799-158298 Theobroma cacao
Thecc1EG011949 0.5kb downstream 0.5kb downstream 1894 true scaffold_3: 155905-157798 Theobroma cacao
Thecc1EG011949 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 155905-156404 Theobroma cacao
Thecc1EG011949 1.0kb upstream 1.0kb upstream 2394 true scaffold_3: 156405-158798 Theobroma cacao
Thecc1EG011949 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 157799-158798 Theobroma cacao
Thecc1EG011949 1.0kb downstream 1.0kb downstream 2394 true scaffold_3: 155405-157798 Theobroma cacao
Thecc1EG011949 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 155405-156404 Theobroma cacao
Thecc1EG011949 2.0kb upstream 2.0kb upstream 3394 true scaffold_3: 156405-159798 Theobroma cacao
Thecc1EG011949 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 157799-159798 Theobroma cacao
Thecc1EG011949 2.0kb downstream 2.0kb downstream 3394 true scaffold_3: 154405-157798 Theobroma cacao
Thecc1EG011949 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 154405-156404 Theobroma cacao
Thecc1EG011949 5.0kb upstream 5.0kb upstream 6394 true scaffold_3: 156405-162798 Theobroma cacao
Thecc1EG011949 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 157799-162798 Theobroma cacao
Thecc1EG011949 5.0kb downstream 5.0kb downstream 6394 true scaffold_3: 151405-157798 Theobroma cacao
Thecc1EG011949 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 151405-156404 Theobroma cacao
Thecc1EG011949 10.0kb upstream 10.0kb upstream 11394 true scaffold_3: 156405-167798 Theobroma cacao
Thecc1EG011949 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 157799-167798 Theobroma cacao
Thecc1EG011949 10.0kb downstream 10.0kb downstream 11394 true scaffold_3: 146405-157798 Theobroma cacao
Thecc1EG011949 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 146405-156404 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829251 5264 Brassicales-Malvales View MSA
124344996 5266 SBM View MSA
124241948 5268 Malvidae View MSA
124070367 5270 Rosid View MSA
123750804 5271 Pentapetalae View MSA
122795172 5272 Eudicot View MSA
122041833 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain