Gene : Thecc1EG012179 T. cacao v1.1
Defline:  (1 of 1) PTHR10625//PTHR10625:SF109 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 2 Genomic Order:  202
Name:  ? Thecc1EG012179 Secondary Identifier:  ? PAC:27448371
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012179 0.5kb upstream 0.5kb upstream 4263 true scaffold_3: 1455838-1460100 Theobroma cacao
Thecc1EG012179 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1455838-1456337 Theobroma cacao
Thecc1EG012179 0.5kb downstream 0.5kb downstream 4263 true scaffold_3: 1456338-1460600 Theobroma cacao
Thecc1EG012179 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1460101-1460600 Theobroma cacao
Thecc1EG012179 1.0kb upstream 1.0kb upstream 4763 true scaffold_3: 1455338-1460100 Theobroma cacao
Thecc1EG012179 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1455338-1456337 Theobroma cacao
Thecc1EG012179 1.0kb downstream 1.0kb downstream 4763 true scaffold_3: 1456338-1461100 Theobroma cacao
Thecc1EG012179 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1460101-1461100 Theobroma cacao
Thecc1EG012179 2.0kb upstream 2.0kb upstream 5763 true scaffold_3: 1454338-1460100 Theobroma cacao
Thecc1EG012179 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1454338-1456337 Theobroma cacao
Thecc1EG012179 2.0kb downstream 2.0kb downstream 5763 true scaffold_3: 1456338-1462100 Theobroma cacao
Thecc1EG012179 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1460101-1462100 Theobroma cacao
Thecc1EG012179 5.0kb upstream 5.0kb upstream 8763 true scaffold_3: 1451338-1460100 Theobroma cacao
Thecc1EG012179 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1451338-1456337 Theobroma cacao
Thecc1EG012179 5.0kb downstream 5.0kb downstream 8763 true scaffold_3: 1456338-1465100 Theobroma cacao
Thecc1EG012179 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1460101-1465100 Theobroma cacao
Thecc1EG012179 10.0kb upstream 10.0kb upstream 13763 true scaffold_3: 1446338-1460100 Theobroma cacao
Thecc1EG012179 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1446338-1456337 Theobroma cacao
Thecc1EG012179 10.0kb downstream 10.0kb downstream 13763 true scaffold_3: 1456338-1470100 Theobroma cacao
Thecc1EG012179 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1460101-1470100 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834309 5264 Brassicales-Malvales View MSA
124338395 5266 SBM View MSA
124239133 5268 Malvidae View MSA
124068435 5270 Rosid View MSA
123739181 5271 Pentapetalae View MSA
122793784 5272 Eudicot View MSA
122043471 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain