Gene : Thecc1EG012169 T. cacao v1.1
Defline:  (1 of 2) K02900 - large subunit ribosomal protein L27Ae (RP-L27Ae, RPL27A) Genomic Order:  194
Name:  ? Thecc1EG012169 Secondary Identifier:  ? PAC:27447868
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012169 0.5kb upstream 0.5kb upstream 1177 true scaffold_3: 1397705-1398881 Theobroma cacao
Thecc1EG012169 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1397705-1398204 Theobroma cacao
Thecc1EG012169 0.5kb downstream 0.5kb downstream 1177 true scaffold_3: 1398205-1399381 Theobroma cacao
Thecc1EG012169 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1398882-1399381 Theobroma cacao
Thecc1EG012169 1.0kb upstream 1.0kb upstream 1677 true scaffold_3: 1397205-1398881 Theobroma cacao
Thecc1EG012169 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1397205-1398204 Theobroma cacao
Thecc1EG012169 1.0kb downstream 1.0kb downstream 1677 true scaffold_3: 1398205-1399881 Theobroma cacao
Thecc1EG012169 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1398882-1399881 Theobroma cacao
Thecc1EG012169 2.0kb upstream 2.0kb upstream 2677 true scaffold_3: 1396205-1398881 Theobroma cacao
Thecc1EG012169 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1396205-1398204 Theobroma cacao
Thecc1EG012169 2.0kb downstream 2.0kb downstream 2677 true scaffold_3: 1398205-1400881 Theobroma cacao
Thecc1EG012169 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1398882-1400881 Theobroma cacao
Thecc1EG012169 5.0kb upstream 5.0kb upstream 5677 true scaffold_3: 1393205-1398881 Theobroma cacao
Thecc1EG012169 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1393205-1398204 Theobroma cacao
Thecc1EG012169 5.0kb downstream 5.0kb downstream 5677 true scaffold_3: 1398205-1403881 Theobroma cacao
Thecc1EG012169 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1398882-1403881 Theobroma cacao
Thecc1EG012169 10.0kb upstream 10.0kb upstream 10677 true scaffold_3: 1388205-1398881 Theobroma cacao
Thecc1EG012169 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1388205-1398204 Theobroma cacao
Thecc1EG012169 10.0kb downstream 10.0kb downstream 10677 true scaffold_3: 1398205-1408881 Theobroma cacao
Thecc1EG012169 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1398882-1408881 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123818145 5264 Brassicales-Malvales Singleton cluster - no MSA
124314468 5266 SBM Singleton cluster - no MSA
124248893 5268 Malvidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain