Gene : Thecc1EG012299 T. cacao v1.1
Defline:  (1 of 1) PTHR22844:SF202 - STOMATAL CYTOKINESIS DEFECTIVE Genomic Order:  302
Name:  ? Thecc1EG012299 Secondary Identifier:  ? PAC:27450870
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012299 0.5kb upstream 0.5kb upstream 34419 true scaffold_3: 2073773-2108191 Theobroma cacao
Thecc1EG012299 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2107692-2108191 Theobroma cacao
Thecc1EG012299 0.5kb downstream 0.5kb downstream 34419 true scaffold_3: 2073273-2107691 Theobroma cacao
Thecc1EG012299 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2073273-2073772 Theobroma cacao
Thecc1EG012299 1.0kb upstream 1.0kb upstream 34919 true scaffold_3: 2073773-2108691 Theobroma cacao
Thecc1EG012299 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2107692-2108691 Theobroma cacao
Thecc1EG012299 1.0kb downstream 1.0kb downstream 34919 true scaffold_3: 2072773-2107691 Theobroma cacao
Thecc1EG012299 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2072773-2073772 Theobroma cacao
Thecc1EG012299 2.0kb upstream 2.0kb upstream 35919 true scaffold_3: 2073773-2109691 Theobroma cacao
Thecc1EG012299 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2107692-2109691 Theobroma cacao
Thecc1EG012299 2.0kb downstream 2.0kb downstream 35919 true scaffold_3: 2071773-2107691 Theobroma cacao
Thecc1EG012299 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2071773-2073772 Theobroma cacao
Thecc1EG012299 5.0kb upstream 5.0kb upstream 38919 true scaffold_3: 2073773-2112691 Theobroma cacao
Thecc1EG012299 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2107692-2112691 Theobroma cacao
Thecc1EG012299 5.0kb downstream 5.0kb downstream 38919 true scaffold_3: 2068773-2107691 Theobroma cacao
Thecc1EG012299 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2068773-2073772 Theobroma cacao
Thecc1EG012299 10.0kb upstream 10.0kb upstream 43919 true scaffold_3: 2073773-2117691 Theobroma cacao
Thecc1EG012299 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2107692-2117691 Theobroma cacao
Thecc1EG012299 10.0kb downstream 10.0kb downstream 43919 true scaffold_3: 2063773-2107691 Theobroma cacao
Thecc1EG012299 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2063773-2073772 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828000 5264 Brassicales-Malvales View MSA
124342011 5266 SBM View MSA
124241708 5268 Malvidae View MSA
124063489 5270 Rosid View MSA
123736587 5271 Pentapetalae View MSA
122787179 5272 Eudicot View MSA
122045572 5273 Angiosperm View MSA
121345381 5274 Embryophyte View MSA
123380209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain