Gene : Thecc1EG012253 T. cacao v1.1
Defline:  (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) Genomic Order:  266
Name:  ? Thecc1EG012253 Secondary Identifier:  ? PAC:27447477
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012253 0.5kb upstream 0.5kb upstream 9517 true scaffold_3: 1821102-1830618 Theobroma cacao
Thecc1EG012253 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1821102-1821601 Theobroma cacao
Thecc1EG012253 0.5kb downstream 0.5kb downstream 9517 true scaffold_3: 1821602-1831118 Theobroma cacao
Thecc1EG012253 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1830619-1831118 Theobroma cacao
Thecc1EG012253 1.0kb upstream 1.0kb upstream 10017 true scaffold_3: 1820602-1830618 Theobroma cacao
Thecc1EG012253 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1820602-1821601 Theobroma cacao
Thecc1EG012253 1.0kb downstream 1.0kb downstream 10017 true scaffold_3: 1821602-1831618 Theobroma cacao
Thecc1EG012253 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1830619-1831618 Theobroma cacao
Thecc1EG012253 2.0kb upstream 2.0kb upstream 11017 true scaffold_3: 1819602-1830618 Theobroma cacao
Thecc1EG012253 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1819602-1821601 Theobroma cacao
Thecc1EG012253 2.0kb downstream 2.0kb downstream 11017 true scaffold_3: 1821602-1832618 Theobroma cacao
Thecc1EG012253 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1830619-1832618 Theobroma cacao
Thecc1EG012253 5.0kb upstream 5.0kb upstream 14017 true scaffold_3: 1816602-1830618 Theobroma cacao
Thecc1EG012253 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1816602-1821601 Theobroma cacao
Thecc1EG012253 5.0kb downstream 5.0kb downstream 14017 true scaffold_3: 1821602-1835618 Theobroma cacao
Thecc1EG012253 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1830619-1835618 Theobroma cacao
Thecc1EG012253 10.0kb upstream 10.0kb upstream 19017 true scaffold_3: 1811602-1830618 Theobroma cacao
Thecc1EG012253 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1811602-1821601 Theobroma cacao
Thecc1EG012253 10.0kb downstream 10.0kb downstream 19017 true scaffold_3: 1821602-1840618 Theobroma cacao
Thecc1EG012253 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1830619-1840618 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830207 5264 Brassicales-Malvales View MSA
124338737 5266 SBM View MSA
124239037 5268 Malvidae View MSA
124060647 5270 Rosid View MSA
123740546 5271 Pentapetalae View MSA
122786206 5272 Eudicot View MSA
122042672 5273 Angiosperm View MSA
121343804 5274 Embryophyte View MSA
123423885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain