Gene : Thecc1EG012521 T. cacao v1.1
Defline:  (1 of 1) PTHR10682:SF10 - FI03258P Genomic Order:  437
Name:  ? Thecc1EG012521 Secondary Identifier:  ? PAC:27449876
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012521 0.5kb upstream 0.5kb upstream 8455 true scaffold_3: 3545620-3554074 Theobroma cacao
Thecc1EG012521 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 3553575-3554074 Theobroma cacao
Thecc1EG012521 0.5kb downstream 0.5kb downstream 8455 true scaffold_3: 3545120-3553574 Theobroma cacao
Thecc1EG012521 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 3545120-3545619 Theobroma cacao
Thecc1EG012521 1.0kb upstream 1.0kb upstream 8955 true scaffold_3: 3545620-3554574 Theobroma cacao
Thecc1EG012521 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 3553575-3554574 Theobroma cacao
Thecc1EG012521 1.0kb downstream 1.0kb downstream 8955 true scaffold_3: 3544620-3553574 Theobroma cacao
Thecc1EG012521 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 3544620-3545619 Theobroma cacao
Thecc1EG012521 2.0kb upstream 2.0kb upstream 9955 true scaffold_3: 3545620-3555574 Theobroma cacao
Thecc1EG012521 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 3553575-3555574 Theobroma cacao
Thecc1EG012521 2.0kb downstream 2.0kb downstream 9955 true scaffold_3: 3543620-3553574 Theobroma cacao
Thecc1EG012521 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 3543620-3545619 Theobroma cacao
Thecc1EG012521 5.0kb upstream 5.0kb upstream 12955 true scaffold_3: 3545620-3558574 Theobroma cacao
Thecc1EG012521 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 3553575-3558574 Theobroma cacao
Thecc1EG012521 5.0kb downstream 5.0kb downstream 12955 true scaffold_3: 3540620-3553574 Theobroma cacao
Thecc1EG012521 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 3540620-3545619 Theobroma cacao
Thecc1EG012521 10.0kb upstream 10.0kb upstream 17955 true scaffold_3: 3545620-3563574 Theobroma cacao
Thecc1EG012521 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 3553575-3563574 Theobroma cacao
Thecc1EG012521 10.0kb downstream 10.0kb downstream 17955 true scaffold_3: 3535620-3553574 Theobroma cacao
Thecc1EG012521 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 3535620-3545619 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840831 5264 Brassicales-Malvales View MSA
124336623 5266 SBM View MSA
124240889 5268 Malvidae View MSA
124068405 5270 Rosid View MSA
123750004 5271 Pentapetalae View MSA
122790676 5272 Eudicot View MSA
122041871 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain