Gene : Thecc1EG012672 T. cacao v1.1
Defline:  (1 of 39) PF03108 - MuDR family transposase (DBD_Tnp_Mut) Genomic Order:  511
Name:  ? Thecc1EG012672 Secondary Identifier:  ? PAC:27450277
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG012672 0.5kb upstream 0.5kb upstream 11915 true scaffold_3: 4996892-5008806 Theobroma cacao
Thecc1EG012672 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 4996892-4997391 Theobroma cacao
Thecc1EG012672 0.5kb downstream 0.5kb downstream 11915 true scaffold_3: 4997392-5009306 Theobroma cacao
Thecc1EG012672 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5008807-5009306 Theobroma cacao
Thecc1EG012672 1.0kb upstream 1.0kb upstream 12415 true scaffold_3: 4996392-5008806 Theobroma cacao
Thecc1EG012672 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 4996392-4997391 Theobroma cacao
Thecc1EG012672 1.0kb downstream 1.0kb downstream 12415 true scaffold_3: 4997392-5009806 Theobroma cacao
Thecc1EG012672 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5008807-5009806 Theobroma cacao
Thecc1EG012672 2.0kb upstream 2.0kb upstream 13415 true scaffold_3: 4995392-5008806 Theobroma cacao
Thecc1EG012672 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 4995392-4997391 Theobroma cacao
Thecc1EG012672 2.0kb downstream 2.0kb downstream 13415 true scaffold_3: 4997392-5010806 Theobroma cacao
Thecc1EG012672 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5008807-5010806 Theobroma cacao
Thecc1EG012672 5.0kb upstream 5.0kb upstream 16415 true scaffold_3: 4992392-5008806 Theobroma cacao
Thecc1EG012672 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 4992392-4997391 Theobroma cacao
Thecc1EG012672 5.0kb downstream 5.0kb downstream 16415 true scaffold_3: 4997392-5013806 Theobroma cacao
Thecc1EG012672 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5008807-5013806 Theobroma cacao
Thecc1EG012672 10.0kb upstream 10.0kb upstream 21415 true scaffold_3: 4987392-5008806 Theobroma cacao
Thecc1EG012672 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 4987392-4997391 Theobroma cacao
Thecc1EG012672 10.0kb downstream 10.0kb downstream 21415 true scaffold_3: 4997392-5018806 Theobroma cacao
Thecc1EG012672 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5008807-5018806 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838876 5264 Brassicales-Malvales View MSA
124322511 5266 SBM View MSA
124169157 5268 Malvidae View MSA
123892279 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain